RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1098727" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1098727 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26592593 26592593 PRJNA1098727_P_NODE_14561_length_165_cov_0.896552_g14320_i0 PRJNA1098727 14561 165 0.896552 1.4793108 Chloroflexota bacterium 2026724 Bacteria Bacteria 46.2 9.9e-5   NR MBT9165939.1 2026724 g14320 i0 46.2 0.945454545454545 52 28 94.5 0 2 157 22 73 MBT9165939.1 hypothetical protein [Chloroflexota bacterium] diamond 156 46.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27762892 27762892 PRJNA1098727_P_NODE_15324_length_163_cov_0.912281_g15083_i0 PRJNA1098727 15324 163 0.912281 1.48701803 Caldilineaceae bacterium 2614250 Bacteria Bacteria 93.2 1.73e-22   NR MCB0075578.1 2614250 g15083 i0 81.1 1.95092024539877 53 10 97.5 0 3 161 68 120 MCB0075578.1 ATP-binding cassette domain-containing protein [Caldilineaceae bacterium] diamond 318 93.2 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
28195832 28195832 PRJNA1098727_P_NODE_14826_length_164_cov_0.904348_g14585_i0 PRJNA1098727 14826 164 0.904348 1.48313072 Caldilinea 233191 Bacteria Bacteria 89.7 3.12e-20   NR MCE7981694.1 2293554 g14585 i0 75.9 2.96341463414634 54 13 98.8 0 164 3 146 199 MCE7981694.1 transposase [Caldilinea sp. CFX5] diamond 486 89.7 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae Caldilinea Caldilinea sp. CFX5
30320950 30320950 PRJNA1098727_P_NODE_14972_length_164_cov_0.904348_g14731_i0 PRJNA1098727 14972 164 0.904348 1.48313072 Chloroflexota bacterium 2026724 Bacteria Bacteria 82 1.8e-16   NR MBI2758786.1 2026724 g14731 i0 65.4 0.951219512195122 52 18 95.1 0 2 157 319 370 MBI2758786.1 hypothetical protein [Chloroflexota bacterium] diamond 156 82 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;