RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA1098727" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 8 ✖

bioproject 1

  • PRJNA1098727 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27099199 27099199 PRJNA1098727_P_NODE_13542_length_167_cov_0.881356_g13301_i0 PRJNA1098727 13542 167 0.881356 1.47186452 Halolamina sediminis 1480675 Archaea Archaea 80.5 7.85e-17   NR WP_053948864.1 1480675 g13301 i0 67.3 1.97604790419162 55 18 98.8 0 165 1 88 142 WP_053948864.1 DUF7504 family protein [Halolamina sediminis] diamond 330 80.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halolamina Halolamina sediminis
27596213 27596213 PRJNA1098727_P_NODE_12804_length_169_cov_0.866667_g12563_i0 PRJNA1098727 12804 169 0.866667 1.46466723 Haloferacaceae 1644056 Archaea Archaea 53.5 2.08e-7   NR WP_156587972.1 2668072 g12563 i0 68.6 2.16568047337278 35 11 62.1 0 106 2 5 39 WP_156587972.1 nucleotidyltransferase family protein [Halorubrum sp. CBA1125] diamond 366 53.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. CBA1125
28448789 28448789 PRJNA1098727_P_NODE_15906_length_162_cov_0.920354_g15665_i0 PRJNA1098727 15906 162 0.920354 1.49097348 Halobacteriales 2235 Archaea Archaea 48.1 1.59e-4   NR WP_197570634.1 1407499 g15665 i0 42.3 1.92592592592593 52 30 96.3 0 4 159 244 295 WP_197570634.1 histidine kinase N-terminal 7TM domain-containing protein [Halobacterium hubeiense] diamond 312 48.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium hubeiense
29467279 29467279 PRJNA1098727_P_NODE_13590_length_167_cov_0.881356_g13349_i0 PRJNA1098727 13590 167 0.881356 1.47186452 Haloplanus sp. 1961696 Archaea Archaea 82 1.13e-18   NR MFB6256119.1 1961696 g13349 i0 95 0.718562874251497 40 2 71.9 0 165 46 57 96 MFB6256119.1 hypothetical protein [Haloplanus sp.] diamond 120 82 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus sp.
29751513 29751513 PRJNA1098727_P_NODE_12891_length_169_cov_0.866667_g12650_i0 PRJNA1098727 12891 169 0.866667 1.46466723 Halanaeroarchaeum sulfurireducens 1604004 Archaea Archaea 53.5 2.05e-6   NR WP_050047402.1 1604004 g12650 i0 57.1 0.869822485207101 49 19 87 1 18 164 2 48 WP_050047402.1 methyl-accepting chemotaxis protein [Halanaeroarchaeum sulfurireducens] diamond 147 53.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halanaeroarchaeum Halanaeroarchaeum sulfurireducens
29783299 29783299 PRJNA1098727_P_NODE_15791_length_162_cov_0.920354_g15550_i0 PRJNA1098727 15791 162 0.920354 1.49097348 Halanaeroarchaeum sp. HSR-CO 2866382 Archaea Archaea 93.6 8.290000000000001e-21   NR WP_259518771.1 2866382 g15550 i0 88.5 0.962962962962963 52 6 96.3 0 159 4 228 279 WP_259518771.1 ABC transporter ATP-binding protein [Halanaeroarchaeum sp. HSR-CO] diamond 156 93.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halanaeroarchaeum Halanaeroarchaeum sp. HSR-CO
31806040 31806040 PRJNA1098727_P_NODE_11617_length_177_cov_1.460938_g11376_i0 PRJNA1098727 11617 177 1.460938 2.58586026 Natronomonas sp. LN261 2750669 Archaea Archaea 80.9 2.51e-16   NR WP_181691746.1 2750669 g11376 i0 100 0.677966101694915 40 0 67.8 0 3 122 280 319 WP_181691746.1 transcriptional regulator [Natronomonas sp. LN261] diamond 120 80.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp. LN261
31995925 31995925 PRJNA1098727_P_NODE_14858_length_164_cov_0.904348_g14617_i0 PRJNA1098727 14858 164 0.904348 1.48313072 Halobacterium salinarum 2242 Archaea Archaea 110 3.34e-29   NR WP_285255381.1 2242 g14617 i0 98.1 0.98780487804878 54 1 98.8 0 162 1 42 95 WP_285255381.1 hypothetical protein [Halobacterium salinarum] diamond 162 110 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium salinarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;