RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1098727" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA1098727 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
211102 211102 PRJNA1098727_P_NODE_14821_length_164_cov_0.904348_g14580_i0 PRJNA1098727 14821 164 0.904348 1.48313072 Bacillati 1783272 Bacteria Bacteria 84.7 1.55e-17   NR MFA5460301.1 2053589 g14580 i0 77.4 1.95731707317073 53 12 97 0 162 4 263 315 MFA5460301.1 RNA-guided endonuclease TnpB family protein [Candidatus Paceibacterota bacterium] diamond 321 85.1 0.995299647473561 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27920401 27920401 PRJNA1098727_P_NODE_14805_length_164_cov_0.904348_g14564_i0 PRJNA1098727 14805 164 0.904348 1.48313072 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 41.6 0.00585   NR MCK5016727.1 2735830 g14564 i0 44.2 1.68292682926829 43 22 78.7 1 135 7 31 71 MCK5016727.1 hypothetical protein [Candidatus Peribacteraceae bacterium] diamond 276 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
28741420 28741420 PRJNA1098727_P_NODE_9947_length_192_cov_1.811189_g9706_i0 PRJNA1098727 9947 192 1.811189 3.47748288 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 94 1.49e-23   NR NBP58003.1 2802965 g9706 i0 95.7 0.71875 46 2 71.9 0 55 192 1 46 NBP58003.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 138 94 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
29372931 29372931 PRJNA1098727_P_NODE_15569_length_162_cov_1.380531_g15328_i0 PRJNA1098727 15569 162 1.380531 2.23646022 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 60.5 5.03e-9   NR NBP58002.1 2802965 g15328 i0 65.9 0.759259259259259 41 14 75.9 0 39 161 237 277 NBP58002.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 123 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
32272113 32272113 PRJNA1098727_P_NODE_14078_length_166_cov_0.888889_g13837_i0 PRJNA1098727 14078 166 0.888889 1.47555574 Bacteria 2 Bacteria Bacteria 63.2 6.26e-10   NR MCA9332305.1 2026720 g13837 i0 81.8 2.3855421686747 33 6 59.6 0 3 101 272 304 MCA9332305.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 396 63.5 0.995275590551181 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32880236 32880236 PRJNA1098727_P_NODE_15420_length_163_cov_0.912281_g15179_i0 PRJNA1098727 15420 163 0.912281 1.48701803 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 42 0.0243   NR MCK4546319.1 2212470 g15179 i0 37.7 0.975460122699387 53 32 95.7 1 5 160 85 137 MCK4546319.1 PD40 domain-containing protein [Candidatus Eiseniibacteriota bacterium] diamond 159 42 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;