RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1097627" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 4 ✖

bioproject 1

  • PRJNA1097627 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27762886 27762886 PRJNA1097627_P_NODE_165764_length_247_cov_0.885057_g165471_i0 PRJNA1097627 165764 247 0.885057 2.18609079 Guiyang chuvirus 1 2905498 Viruses Viruses 46.2 0.00232   NR UHK03045.1 2905498 g165471 i0 64.7 0.412955465587045 34 12 41.3 0 3 104 177 210 UHK03045.1 MAG: hypothetical protein GuCV1_gp2 [Guiyang chuvirus 1] diamond 102 46.2 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Guiyang chuvirus 1
30130486 30130486 PRJNA1097627_P_NODE_188132_length_243_cov_0.905882_g187839_i0 PRJNA1097627 188132 243 0.905882 2.20129326 Comovirinae sp. 2767531 Viruses Viruses 137 2.5799999999999996e-35   NR QNN26327.1 2767531 g187839 i0 92.5 0.987654320987654 80 6 98.8 0 242 3 23 102 QNN26327.1 polyprotein 2 [Comovirinae sp.] diamond 240 137 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae   Comovirinae sp.
30162196 30162196 PRJNA1097627_P_NODE_159632_length_248_cov_0.880000_g159339_i0 PRJNA1097627 159632 248 0.88 2.1824 Caudoviricetes sp. 2832643 Viruses Viruses 40.4 0.0464   NR DAY40205.1 2832643 g159339 i0 39.6 0.580645161290323 48 29 58.1 0 75 218 3 50 DAY40205.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 144 40.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32122607 32122607 PRJNA1097627_P_NODE_47598_length_320_cov_1.097166_g47306_i0 PRJNA1097627 47598 320 1.097166 3.5109312 Comovirinae sp. 2767531 Viruses Viruses 200 2.15e-57   NR QNN26327.1 2767531 g47306 i0 95.3 0.99375 106 5 99.4 0 318 1 101 206 QNN26327.1 polyprotein 2 [Comovirinae sp.] diamond 318 200 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae   Comovirinae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;