RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1097627" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1097627 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27193958 27193958 PRJNA1097627_P_NODE_100742_length_273_cov_1.385000_g100449_i0 PRJNA1097627 100742 273 1.385 3.78105 Caldilineaceae bacterium 2614250 Bacteria Bacteria 150 7.58e-40   NR MCC6456508.1 2614250 g100449 i0 80.7 0.967032967032967 88 17 96.7 0 2 265 1321 1408 MCC6456508.1 glycosyltransferase family 39 protein [Caldilineaceae bacterium] diamond 264 150 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
29404491 29404491 PRJNA1097627_P_NODE_203069_length_241_cov_0.916667_g202776_i0 PRJNA1097627 203069 241 0.916667 2.20916747 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 60.1 2.7e-8   NR HXG40035.1 2952938 g202776 i0 63.4 1.53112033195021 41 15 51 0 123 1 1 41 HXG40035.1 Wzz/FepE/Etk N-terminal domain-containing protein [Candidatus Limnocylindrales bacterium] diamond 369 60.1 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;