RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA1095825" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1095825 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26846391 26846391 PRJNA1095825_P_NODE_44061_length_580_cov_1.366864_g41015_i0 PRJNA1095825 44061 580 1.366864 7.9278112 Picornaviridae sp. 1530251 Viruses Viruses 360 1.96e-111   NR XDJ26655.1 1530251 g41015 i0 86.5 0.998275862068966 193 26 99.8 0 2 580 1317 1509 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 579 360 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
26940962 26940962 PRJNA1095825_P_NODE_40222_length_610_cov_1.713222_g37182_i0 PRJNA1095825 40222 610 1.713222 10.4506542 Picornaviridae sp. 1530251 Viruses Viruses 400 1.92e-125   NR XDJ26655.1 1530251 g37182 i0 97 0.998360655737705 203 6 99.8 0 2 610 558 760 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 609 400 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
28615174 28615174 PRJNA1095825_P_NODE_27807_length_763_cov_2.694203_g24877_i0 PRJNA1095825 27807 763 2.694203 20.55676889 Picornaviridae sp. 1530251 Viruses Viruses 520 5.089999999999999e-168   NR XDJ26655.1 1530251 g24877 i0 97.6 0.99475753604194 253 6 99.5 0 3 761 1046 1298 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 759 520 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
29183603 29183603 PRJNA1095825_P_NODE_20909_length_933_cov_1.745349_g18175_i0 PRJNA1095825 20909 933 1.745349 16.28410617 Picornaviridae sp. 1530251 Viruses Viruses 551 9.17e-179   NR XDJ26655.1 1530251 g18175 i0 86.1 0.996784565916399 310 43 99.7 0 2 931 1571 1880 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 930 551 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
30130449 30130449 PRJNA1095825_P_NODE_150492_length_317_cov_1.262295_g147429_i0 PRJNA1095825 150492 317 1.262295 4.00147515 Picornaviridae sp. 1530251 Viruses Viruses 197 5.84e-60   NR XDJ26656.1 1530251 g147429 i0 88.6 0.993690851735016 105 12 99.4 0 317 3 50 154 XDJ26656.1 capsid protein [Picornaviridae sp.] diamond 315 197 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;