RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA1095825" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1095825 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28425776 28425776 PRJNA1095825_P_NODE_283026_length_243_cov_0.905882_g279963_i0 PRJNA1095825 283026 243 0.905882 2.20129326 Candidatus Nitrosocosmicus sp. 2109671 Archaea Archaea 76.6 1.9e-14   NR MDF0681295.1 2109671 g279963 i0 97.4 0.481481481481481 39 1 48.1 0 242 126 261 299 MDF0681295.1 IS5 family transposase [Candidatus Nitrosocosmicus sp.] diamond 117 76.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
30036086 30036086 PRJNA1095825_P_NODE_294551_length_241_cov_0.916667_g291488_i0 PRJNA1095825 294551 241 0.916667 2.20916747 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 125 1.98e-32   NR HEX7141960.1 2169593 g291488 i0 79.5 0.970954356846473 78 15 95.9 1 3 233 307 384 HEX7141960.1 metallophosphoesterase [Nitrososphaeraceae archaeon] diamond 234 125 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30604673 30604673 PRJNA1095825_P_NODE_261753_length_247_cov_0.885057_g258690_i0 PRJNA1095825 261753 247 0.885057 2.18609079 Nitrososphaerales archaeon 2268197 Archaea Archaea 45.8 0.00268   NR MFI5406998.1 2268197 g258690 i0 39.7 1.50607287449393 63 36 74.1 2 60 242 40 102 MFI5406998.1 hypothetical protein [Nitrososphaerales archaeon] diamond 372 45.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
31299926 31299926 PRJNA1095825_P_NODE_261475_length_247_cov_0.885057_g258412_i0 PRJNA1095825 261475 247 0.885057 2.18609079 Nitrosopumilales archaeon 2026768 Archaea Archaea 147 5.13e-43   NR RPJ31596.1 2026768 g258412 i0 93.8 1.97975708502024 81 5 98.4 0 246 4 21 101 RPJ31596.1 MAG: RNA-binding protein [Nitrosopumilales archaeon] diamond 489 147 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales     Nitrosopumilales archaeon
31774288 31774288 PRJNA1095825_P_NODE_239257_length_251_cov_0.865169_g236194_i0 PRJNA1095825 239257 251 0.865169 2.17157419 Nitrososphaerota archaeon 2026795 Archaea Archaea 110 4.44e-26   NR MDG7001629.1 2026795 g236194 i0 72 0.9800796812749 82 19 98 2 4 249 113 190 MDG7001629.1 hypothetical protein [Nitrososphaerota archaeon] diamond 246 110 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;