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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA1095825" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1095825 · 27 ✖

analysis 1

  • diamond · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26878057 26878057 PRJNA1095825_P_NODE_262601_length_247_cov_0.885057_g259538_i0 PRJNA1095825 262601 247 0.885057 2.18609079 Globodera pallida 36090 Nematoda Nematoda 54.7 2.39e-6   NR KAI3411181.1 36090 g259538 i0 38.3 0.728744939271255 60 37 72.9 0 194 15 354 413 KAI3411181.1 hypothetical protein GPALN_003264 [Globodera pallida] diamond 180 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
26972640 26972640 PRJNA1095825_P_NODE_297642_length_241_cov_0.916667_g294579_i0 PRJNA1095825 297642 241 0.916667 2.20916747 Heterodera trifolii 157864 Nematoda Nematoda 111 2.55e-26   NR KAL3116818.1 157864 g294579 i0 77.4 2.31535269709544 62 14 77.2 0 3 188 313 374 KAL3116818.1 hypothetical protein niasHT_003184 [Heterodera trifolii] diamond 558 111 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
27257267 27257267 PRJNA1095825_P_NODE_238283_length_251_cov_0.865169_g235220_i0 PRJNA1095825 238283 251 0.865169 2.17157419 Globodera pallida 36090 Nematoda Nematoda 60.8 1.52e-8   NR KAI3416553.1 36090 g235220 i0 44.3 1.60159362549801 70 37 81.3 1 205 2 254 323 KAI3416553.1 hypothetical protein GPALN_006093 [Globodera pallida] diamond 402 60.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
27257276 27257276 PRJNA1095825_P_NODE_300223_length_226_cov_2.013072_g297160_i0 PRJNA1095825 300223 226 2.013072 4.54954272 Globodera pallida 36090 Nematoda Nematoda 103 4.23e-24   NR KAI3413790.1 36090 g297160 i0 89.5 0.756637168141593 57 6 75.7 0 42 212 241 297 KAI3413790.1 hypothetical protein GPALN_011271 [Globodera pallida] diamond 171 103 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
27352349 27352349 PRJNA1095825_P_NODE_278203_length_244_cov_0.900585_g275140_i0 PRJNA1095825 278203 244 0.900585 2.1974274 Globodera pallida 36090 Nematoda Nematoda 84.3 4.55e-17   NR KAI3418226.1 36090 g275140 i0 100 0.442622950819672 36 0 44.3 0 2 109 160 195 KAI3418226.1 hypothetical protein GPALN_010443 [Globodera pallida] diamond 108 84.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
27478416 27478416 PRJNA1095825_P_NODE_201883_length_275_cov_1.524752_g198820_i0 PRJNA1095825 201883 275 1.524752 4.193068 Globodera pallida 36090 Nematoda Nematoda 105 4.859999999999999e-24   NR KAI3422158.1 36090 g198820 i0 94.3 0.578181818181818 53 3 57.8 0 160 2 1 53 KAI3422158.1 hypothetical protein GPALN_012691 [Globodera pallida] diamond 159 105 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
27848506 27848506 PRJNA1095825_P_NODE_32284_length_695_cov_1.586817_g29295_i0 PRJNA1095825 32284 695 1.586817 11.02837815 Rhabditida 6236 Nematoda Nematoda 156 2.1e-42   NR KAL3073343.1 157864 g29295 i0 39.6 13.6402877697842 227 119 97.6 2 680 3 51 260 KAL3073343.1 hypothetical protein niasHT_038700 [Heterodera trifolii] diamond 9480 156 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
28078231 28078231 PRJNA1095825_P_NODE_224425_length_259_cov_1.268817_g221362_i0 PRJNA1095825 224425 259 1.268817 3.28623603 Trichinella nelsoni 6336 Nematoda Nematoda 74.7 2.62e-13   NR KRX13086.1 6336 g221362 i0 42.7 8.53667953667954 82 47 95 0 13 258 118 199 KRX13086.1 Pol polyprotein, partial [Trichinella nelsoni] diamond 2211 74.7 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella nelsoni
28109771 28109771 PRJNA1095825_P_NODE_283085_length_243_cov_0.905882_g280022_i0 PRJNA1095825 283085 243 0.905882 2.20129326 Globodera pallida 36090 Nematoda Nematoda 89.4 1.46e-18   NR KAI3412030.1 36090 g280022 i0 81.8 0.679012345679012 55 8 65.4 2 161 3 656 710 KAI3412030.1 hypothetical protein GPALN_002082 [Globodera pallida] diamond 165 89.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
28235935 28235935 PRJNA1095825_P_NODE_285746_length_243_cov_0.905882_g282683_i0 PRJNA1095825 285746 243 0.905882 2.20129326 Globodera pallida 36090 Nematoda Nematoda 93.6 3.97e-20   NR KAI3408279.1 36090 g282683 i0 68.3 2.30864197530864 63 20 77.8 0 46 234 356 418 KAI3408279.1 hypothetical protein GPALN_011914 [Globodera pallida] diamond 561 93.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
28267600 28267600 PRJNA1095825_P_NODE_229086_length_256_cov_1.240437_g226023_i0 PRJNA1095825 229086 256 1.240437 3.17551872 Globodera pallida 36090 Nematoda Nematoda 64.7 2.8e-10   NR KAI3416901.1 36090 g226023 i0 76.2 0.4921875 42 10 49.2 0 254 129 182 223 KAI3416901.1 hypothetical protein GPALN_002978 [Globodera pallida] diamond 126 64.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
28267603 28267603 PRJNA1095825_P_NODE_239066_length_251_cov_0.865169_g236003_i0 PRJNA1095825 239066 251 0.865169 2.17157419 Anisakis simplex 6269 Nematoda Nematoda 55.8 9.48e-8   NR VDK28727.1 6269 g236003 i0 38.8 2.9402390438247 80 45 90.8 1 5 232 6 85 VDK28727.1 unnamed protein product [Anisakis simplex] diamond 738 55.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
28709991 28709991 PRJNA1095825_P_NODE_246027_length_250_cov_0.870056_g242964_i0 PRJNA1095825 246027 250 0.870056 2.17514 Heterodera trifolii 157864 Nematoda Nematoda 89.7 8.25e-19   NR KAL3124924.1 157864 g242964 i0 75.4 0.828 69 12 82.8 2 209 3 205 268 KAL3124924.1 hypothetical protein niasHT_001817 [Heterodera trifolii] diamond 207 89.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
29530800 29530800 PRJNA1095825_P_NODE_266470_length_246_cov_0.890173_g263407_i0 PRJNA1095825 266470 246 0.890173 2.18982558 Heterodera trifolii 157864 Nematoda Nematoda 68.2 4.34e-11   NR KAL3091112.1 157864 g263407 i0 69.8 1.04878048780488 43 13 52.4 0 44 172 2238 2280 KAL3091112.1 hypothetical protein niasHT_027872 [Heterodera trifolii] diamond 258 68.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
29616484 29616484 PRJNA1095825_P_NODE_280170_length_244_cov_0.900585_g277107_i0 PRJNA1095825 280170 244 0.900585 2.1974274 Opisthokonta 33154 Nematoda Nematoda 89 4.62e-19   NR KRX89815.1 6337 g277107 i0 48.9 7.34016393442623 88 38 99.6 2 244 2 181 268 KRX89815.1 Cathepsin D, partial [Trichinella pseudospiralis] diamond 1791 89 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
29751501 29751501 PRJNA1095825_P_NODE_285251_length_243_cov_0.905882_g282188_i0 PRJNA1095825 285251 243 0.905882 2.20129326 Globodera pallida 36090 Nematoda Nematoda 45.1 0.00601   NR KAI3422544.1 36090 g282188 i0 95.2 0.259259259259259 21 1 25.9 0 181 243 1584 1604 KAI3422544.1 hypothetical protein GPALN_013047 [Globodera pallida] diamond 63 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
29806109 29806109 PRJNA1095825_P_NODE_293851_length_241_cov_0.916667_g290788_i0 PRJNA1095825 293851 241 0.916667 2.20916747 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 2.3e-6   NR VDM56061.1 334426 g290788 i0 44.4 7.3195020746888 72 37 85.9 2 16 222 65 136 VDM56061.1 unnamed protein product [Angiostrongylus costaricensis] diamond 1764 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus costaricensis
29837733 29837733 PRJNA1095825_P_NODE_273731_length_245_cov_0.895349_g270668_i0 PRJNA1095825 273731 245 0.895349 2.19360505 Rhabditida 6236 Nematoda Nematoda 47.4 9.21e-4   NR KAL3075441.1 97005 g270668 i0 87.5 1.2 24 3 29.4 0 168 239 297 320 KAL3075441.1 hypothetical protein niasHS_011948 [Heterodera schachtii] diamond 294 47.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera schachtii
30636136 30636136 PRJNA1095825_P_NODE_260293_length_247_cov_0.885057_g257230_i0 PRJNA1095825 260293 247 0.885057 2.18609079 Globodera pallida 36090 Nematoda Nematoda 91.3 2.86e-19   NR KAI3416385.1 36090 g257230 i0 97.7 0.522267206477733 43 1 52.2 0 118 246 266 308 KAI3416385.1 hypothetical protein GPALN_005917 [Globodera pallida] diamond 129 91.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
30952491 30952491 PRJNA1095825_P_NODE_299934_length_227_cov_2.454545_g296871_i0 PRJNA1095825 299934 227 2.454545 5.57181715 Globodera pallida 36090 Nematoda Nematoda 60.8 1.25e-8   NR KAI3419420.1 36090 g296871 i0 100 0.356828193832599 27 0 35.7 0 193 113 683 709 KAI3419420.1 hypothetical protein GPALN_006664 [Globodera pallida] diamond 81 60.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
31363376 31363376 PRJNA1095825_P_NODE_290036_length_242_cov_0.911243_g286973_i0 PRJNA1095825 290036 242 0.911243 2.20520806 Meloidogyne enterolobii 390850 Nematoda Nematoda 64.7 4.72e-10   NR CAD2176296.1 390850 g286973 i0 58.9 1.36363636363636 56 21 66.9 1 63 224 189 244 CAD2176296.1 unnamed protein product [Meloidogyne enterolobii] diamond 330 64.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
31426436 31426436 PRJNA1095825_P_NODE_280956_length_243_cov_1.652941_g277893_i0 PRJNA1095825 280956 243 1.652941 4.01664663 Globodera pallida 36090 Nematoda Nematoda 79.3 4.77e-15   NR KAI3415371.1 36090 g277893 i0 100 0.469135802469136 38 0 46.9 0 242 129 731 768 KAI3415371.1 hypothetical protein GPALN_004983 [Globodera pallida] diamond 114 79.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
31837463 31837463 PRJNA1095825_P_NODE_265217_length_246_cov_0.890173_g262154_i0 PRJNA1095825 265217 246 0.890173 2.18982558 Globodera pallida 36090 Nematoda Nematoda 81.6 7.77e-16   NR KAI3413512.1 36090 g262154 i0 94.7 0.463414634146341 38 2 46.3 0 93 206 968 1005 KAI3413512.1 hypothetical protein GPALN_011002 [Globodera pallida] diamond 114 81.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
32027536 32027536 PRJNA1095825_P_NODE_239998_length_251_cov_0.865169_g236935_i0 PRJNA1095825 239998 251 0.865169 2.17157419 Globodera pallida 36090 Nematoda Nematoda 163 1.28e-44   NR KAI3422215.1 36090 g236935 i0 100 0.920318725099602 77 0 92 0 232 2 570 646 KAI3422215.1 hypothetical protein GPALN_012746 [Globodera pallida] diamond 231 163 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
32375659 32375659 PRJNA1095825_P_NODE_247839_length_249_cov_0.875000_g244776_i0 PRJNA1095825 247839 249 0.875 2.17875 Globodera pallida 36090 Nematoda Nematoda 77.8 5.42e-15   NR KAI3416325.1 36090 g244776 i0 65.5 0.662650602409639 55 19 66.3 0 84 248 133 187 KAI3416325.1 hypothetical protein GPALN_005861 [Globodera pallida] diamond 165 77.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
32691206 32691206 PRJNA1095825_P_NODE_277660_length_244_cov_0.900585_g274597_i0 PRJNA1095825 277660 244 0.900585 2.1974274 Globodera pallida 36090 Nematoda Nematoda 47.4 9.24e-4   NR KAI3415622.1 36090 g274597 i0 100 0.233606557377049 19 0 23.4 0 57 1 1 19 KAI3415622.1 hypothetical protein GPALN_005220 [Globodera pallida] diamond 57 47.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Globodera Globodera pallida
32880201 32880201 PRJNA1095825_P_NODE_132460_length_335_cov_2.171756_g129397_i0 PRJNA1095825 132460 335 2.171756 7.2753826 Pristionchus fissidentatus 1538716 Nematoda Nematoda 71.6 2.57e-13   NR GMT18625.1 1538716 g129397 i0 38.9 0.967164179104478 108 61 95.8 2 15 335 10 113 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 324 71.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;