RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1095825" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1095825 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28457363 28457363 PRJNA1095825_P_NODE_248586_length_249_cov_0.875000_g245523_i0 PRJNA1095825 248586 249 0.875 2.17875 Diversispora epigaea 1348612 Fungi Fungi 66.6 1.55e-10   NR RHZ79216.1 1348612 g245523 i0 42 0.975903614457831 81 47 97.6 0 6 248 1024 1104 RHZ79216.1 hypothetical protein Glove_150g17 [Diversispora epigaea] diamond 243 66.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae Diversispora Diversispora epigaea
30501315 30501315 PRJNA1095825_P_NODE_270913_length_245_cov_0.895349_g267850_i0 PRJNA1095825 270913 245 0.895349 2.19360505 Opisthokonta 33154 Fungi Fungi 105 1.87e-24   NR CAG8451584.1 27376 g267850 i0 60.2 15.269387755102 83 31 99.2 1 244 2 221 303 CAG8451584.1 13187_t:CDS:2 [Acaulospora colombiana] diamond 3741 106 0.990566037735849 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Acaulosporaceae Acaulospora Acaulospora colombiana
31322837 31322837 PRJNA1095825_P_NODE_198995_length_277_cov_1.509804_g195932_i0 PRJNA1095825 198995 277 1.509804 4.18215708 Fungi 4751 Fungi Fungi 63.5 2.69e-9   NR KAG0243686.1 90253 g195932 i0 46.8 3.64981949458484 62 29 63.9 2 68 244 470 530 KAG0243686.1 Guanosine-diphosphatase [Actinomortierella wolfii] diamond 1011 63.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Actinomortierella Actinomortierella wolfii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;