RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1095825" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1095825 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30130458 30130458 PRJNA1095825_P_NODE_205712_length_272_cov_1.728643_g202649_i0 PRJNA1095825 205712 272 1.728643 4.70190896 Puccinia striiformis mitovirus 1 2501658 Viruses Viruses 109 1.49e-25   NR YP_010799542.1 2501658 g202649 i0 65.4 0.860294117647059 78 27 86 0 4 237 561 638 YP_010799542.1 putative RNA-dependent RNA polymerase [Puccinia striiformis mitovirus 1] diamond 234 109 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Unuamitovirus Unuamitovirus pust1
30667918 30667918 PRJNA1095825_P_NODE_26953_length_779_cov_1.746459_g24037_i0 PRJNA1095825 26953 779 1.746459 13.60491561 Puccinia striiformis mitovirus 1 2501658 Viruses Viruses 283 9.41e-87   NR YP_010799542.1 2501658 g24037 i0 56.2 1.0012836970475 260 113 99.7 1 779 3 99 358 YP_010799542.1 putative RNA-dependent RNA polymerase [Puccinia striiformis mitovirus 1] diamond 780 283 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Unuamitovirus Unuamitovirus pust1
32312547 32312547 PRJNA1095825_P_NODE_197899_length_278_cov_1.360976_g194836_i0 PRJNA1095825 197899 278 1.360976 3.78351328 Puccinia striiformis mitovirus 1 2501658 Viruses Viruses 103 3.19e-23   NR YP_010799542.1 2501658 g194836 i0 72.3 0.701438848920863 65 18 70.1 0 197 3 483 547 YP_010799542.1 putative RNA-dependent RNA polymerase [Puccinia striiformis mitovirus 1] diamond 195 103 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Unuamitovirus Unuamitovirus pust1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;