RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1095825" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1095825 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27099179 27099179 PRJNA1095825_P_NODE_247862_length_249_cov_0.875000_g244799_i0 PRJNA1095825 247862 249 0.875 2.17875 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 149 1.36e-39   NR NUM54383.1 2030809 g244799 i0 97.3 0.903614457831325 75 2 90.4 0 24 248 418 492 NUM54383.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 225 149 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28867653 28867653 PRJNA1095825_P_NODE_253108_length_248_cov_0.948571_g250045_i0 PRJNA1095825 253108 248 0.948571 2.35245608 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 149 1.58e-44   NR MBL7650399.1 2030809 g250045 i0 90.1 2.95161290322581 81 8 98 0 247 5 41 121 MBL7650399.1 xylose isomerase [Candidatus Hydrogenedentota bacterium] diamond 732 149 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29341393 29341393 PRJNA1095825_P_NODE_285249_length_243_cov_0.905882_g282186_i0 PRJNA1095825 285249 243 0.905882 2.20129326 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 131 1.2699999999999998e-35   NR HNR37082.1 2030809 g282186 i0 73.8 1.97530864197531 80 21 98.8 0 243 4 45 124 HNR37082.1 transketolase [Candidatus Hydrogenedentota bacterium] diamond 480 131 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29941438 29941438 PRJNA1095825_P_NODE_298571_length_237_cov_2.609756_g295508_i0 PRJNA1095825 298571 237 2.609756 6.18512172 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 85.9 2.21e-17   NR MBX3180936.1 2030809 g295508 i0 55.6 0.911392405063291 72 30 91.1 1 11 226 169 238 MBX3180936.1 glucosidase [Candidatus Hydrogenedentota bacterium] diamond 216 85.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30162172 30162172 PRJNA1095825_P_NODE_203312_length_274_cov_1.527363_g200249_i0 PRJNA1095825 203312 274 1.527363 4.18497462 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 91.7 3.4e-19   NR MCH8205306.1 2030809 g200249 i0 48.4 0.996350364963504 91 47 99.6 0 274 2 155 245 MCH8205306.1 HD domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 273 91.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30509936 30509936 PRJNA1095825_P_NODE_246693_length_249_cov_1.556818_g243630_i0 PRJNA1095825 246693 249 1.556818 3.87647682 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 155 1.2499999999999996e-43   NR MBL7648222.1 2030809 g243630 i0 86.6 3.95180722891566 82 11 98.8 0 248 3 175 256 MBL7648222.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Candidatus Hydrogenedentota bacterium] diamond 984 155 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;