RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1095825" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1095825 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11678533 11678533 PRJNA1095825_P_NODE_153390_length_314_cov_2.464730_g150327_i0 PRJNA1095825 153390 314 2.46473 7.7392522 Theromyzon tessulatum 13286 Annelida Annelida 120 3.7699999999999995e-30   NR AAN28680.1 13286 g150327 i0 66.7 0.888535031847134 93 24 82.2 3 272 15 259 351 AAN28680.1 cathepsin L [Theromyzon tessulatum] diamond 279 120 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Theromyzon Theromyzon tessulatum
28962637 28962637 PRJNA1095825_P_NODE_192328_length_282_cov_1.373206_g189265_i0 PRJNA1095825 192328 282 1.373206 3.87244092 Ridgeia piscesae 27915 Annelida Annelida 101 1.67e-24   NR KAK2185756.1 27915 g189265 i0 68.4 5.88297872340426 79 22 80.9 1 13 240 56 134 KAK2185756.1 hypothetical protein NP493_223g02027 [Ridgeia piscesae] diamond 1659 101 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
30794220 30794220 PRJNA1095825_P_NODE_227234_length_257_cov_1.293478_g224171_i0 PRJNA1095825 227234 257 1.293478 3.32423846 Helobdella robusta 6412 Annelida Annelida 57.4 1.95e-7   NR XP_009020192.1 6412 g224171 i0 76.5 0.968871595330739 34 7 38.5 1 125 223 11 44 XP_009020192.1 hypothetical protein HELRODRAFT_174496 [Helobdella robusta] diamond 249 57.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;