RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1095825" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 7 ✖

bioproject 1

  • PRJNA1095825 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7853716 7853716 PRJNA1095825_P_NODE_276607_length_244_cov_0.900585_g273544_i0 PRJNA1095825 276607 244 0.900585 2.1974274 Deinococcus taklimakanensis 536443 Bacteria Bacteria 105 2.06e-25   NR WP_386843102.1 536443 g273544 i0 90.5 1.69672131147541 84 4 98.4 1 242 3 43 126 WP_386843102.1 NUDIX domain-containing protein [Deinococcus taklimakanensis] diamond 414 105 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus taklimakanensis
27564246 27564246 PRJNA1095825_P_NODE_169104_length_300_cov_1.356828_g166041_i0 PRJNA1095825 169104 300 1.356828 4.070484 Deinococcus 1298 Bacteria Bacteria 108 8.89e-26   NR WP_295816647.1 158789 g166041 i0 50.9 5.26 106 45 99 2 298 2 211 316 WP_295816647.1 alpha/beta hydrolase [uncultured Deinococcus sp.] diamond 1578 108 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus uncultured Deinococcus sp.
27983549 27983549 PRJNA1095825_P_NODE_209205_length_270_cov_1.233503_g206142_i0 PRJNA1095825 209205 270 1.233503 3.3304581 Deinococcus sp. NW-56 2080419 Bacteria Bacteria 158 1.1e-42   NR WP_104989975.1 2080419 g206142 i0 80 2 90 18 100 0 1 270 350 439 WP_104989975.1 EcoAI/FtnUII family type I restriction enzme subunit R [Deinococcus sp. NW-56] diamond 540 158 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. NW-56
28962644 28962644 PRJNA1095825_P_NODE_221348_length_261_cov_1.638298_g218285_i0 PRJNA1095825 221348 261 1.638298 4.27595778 Deinococcota bacterium 1913990 Bacteria Bacteria 113 7.32e-30   NR NBC95014.1 1913990 g218285 i0 62.5 0.919540229885057 80 30 92 0 240 1 1 80 NBC95014.1 DUF4065 domain-containing protein [Deinococcota bacterium] diamond 240 113 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
29435707 29435707 PRJNA1095825_P_NODE_274530_length_245_cov_0.895349_g271467_i0 PRJNA1095825 274530 245 0.895349 2.19360505 Deinococcus sp. Leaf326 1736338 Bacteria Bacteria 155 6.089999999999998e-42   NR WP_056299193.1 1736338 g271467 i0 93.8 0.991836734693878 81 5 99.2 0 244 2 196 276 WP_056299193.1 VirB4 family type IV secretion system protein [Deinococcus sp. Leaf326] diamond 243 155 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. Leaf326
30667921 30667921 PRJNA1095825_P_NODE_276833_length_244_cov_0.900585_g273770_i0 PRJNA1095825 276833 244 0.900585 2.1974274 Deinococcus taklimakanensis 536443 Bacteria Bacteria 162 1.02e-46   NR WP_386842847.1 536443 g273770 i0 100 0.995901639344262 81 0 99.6 0 244 2 244 324 WP_386842847.1 3-dehydroquinate synthase [Deinococcus taklimakanensis] diamond 243 162 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus taklimakanensis
30699419 30699419 PRJNA1095825_P_NODE_192394_length_282_cov_1.287081_g189331_i0 PRJNA1095825 192394 282 1.287081 3.62956842 Synergistales bacterium 2268201 Bacteria Bacteria 79.3 7.15e-15   NR MFA0889601.1 2268201 g189331 i0 66.7 1.81914893617021 57 19 60.6 0 171 1 1 57 MFA0889601.1 glycine/sarcosine/betaine reductase component B subunit [Synergistales bacterium] diamond 513 79.3 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;