RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1093380" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA1093380 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27288849 27288849 PRJNA1093380_P_NODE_9803_length_263_cov_1.621053_g9697_i0 PRJNA1093380 9803 263 1.621053 4.26336939 Agrobacterium phage Atu_ph 3435407 Viruses Viruses 104 6.28e-25   NR YP_009612140.1 2024264 g9697 i0 63.2 0.992395437262357 87 32 99.2 0 2 262 40 126 YP_009612140.1 hypothetical protein FDI40_gp475 [Agrobacterium phage Atu_ph07] diamond 261 104 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Polybotosvirus Polybotosvirus Atuph07
31015472 31015472 PRJNA1093380_P_NODE_8795_length_269_cov_1.387755_g8689_i0 PRJNA1093380 8795 269 1.387755 3.73306095 Ralstonia phage RSK1 1417599 Viruses Viruses 115 4.97e-28   NR YP_008853800.1 1417599 g8689 i0 76.7 0.95910780669145 86 15 94.8 2 268 14 419 500 YP_008853800.1 released from the phage upon host infection [Ralstonia phage RSK1] diamond 258 115 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Firingavirus Firingavirus RSK1
32461879 32461879 PRJNA1093380_P_NODE_12179_length_251_cov_0.865169_g12073_i0 PRJNA1093380 12179 251 0.865169 2.17157419 Firingavirus 2843381 Viruses Viruses 145 4.3499999999999997e-38   NR YP_008853801.1 1417599 g12073 i0 86.7 3.9681274900398402 83 11 99.2 0 3 251 976 1058 YP_008853801.1 putative transglycosylase [Ralstonia phage RSK1] diamond 996 145 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Firingavirus Firingavirus RSK1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;