contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA1093008" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27983529 | 27983529 | PRJNA1093008_S_NODE_49725_length_294_cov_2.837104_g49398_i0 | PRJNA1093008 | 49725 | 294 | 2.837104 | 8.34108576 | Anisakis simplex | 6269 | Nematoda | Nematoda | 44.3 | 0.0207 | NR | VDK51737.1 | 6269 | g49398 | i0 | 40 | 0.561224489795918 | 55 | 31 | 54.1 | 1 | 67 | 225 | 1063 | 1117 | VDK51737.1 unnamed protein product [Anisakis simplex] | diamond | 165 | 44.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Anisakidae | Anisakis | Anisakis simplex | |
| 28132937 | 28132937 | PRJNA1093008_S_NODE_17685_length_385_cov_9.711538_g17358_i0 | PRJNA1093008 | 17685 | 385 | 9.711538 | 37.3894213 | Metazoa | 33208 | Nematoda | Nematoda | 158 | 2.83e-47 | NR | VDK43645.1 | 6269 | g17358 | i0 | 100 | 167.937662337662 | 68 | 0 | 53 | 0 | 384 | 181 | 50 | 117 | VDK43645.1 unnamed protein product [Anisakis simplex] | diamond | 64656 | 158 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Anisakidae | Anisakis | Anisakis simplex | |
| 28322223 | 28322223 | PRJNA1093008_S_NODE_97346_length_237_cov_3.317073_g97019_i0 | PRJNA1093008 | 97346 | 237 | 3.317073 | 7.86146301 | Metazoa | 33208 | Nematoda | Nematoda | 82 | 4.89e-16 | NR | CAD5231976.1 | 6326 | g97019 | i0 | 61.4 | 4.86075949367089 | 57 | 22 | 72.2 | 0 | 237 | 67 | 425 | 481 | CAD5231976.1 unnamed protein product [Bursaphelenchus xylophilus] | diamond | 1152 | 82.4 | 0.995145631067961 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Bursaphelenchus | Bursaphelenchus xylophilus | |
| 28678375 | 28678375 | PRJNA1093008_S_NODE_91067_length_244_cov_1.654971_g90740_i0 | PRJNA1093008 | 91067 | 244 | 1.654971 | 4.03812924 | Aphelenchoides besseyi | 269767 | Nematoda | Nematoda | 45.1 | 0.00547 | NR | KAI6186722.1 | 269767 | g90740 | i0 | 33.3 | 0.774590163934426 | 63 | 42 | 77.5 | 0 | 213 | 25 | 84 | 146 | KAI6186722.1 hypothetical protein M3Y98_00163400 [Aphelenchoides besseyi] | diamond | 189 | 45.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Aphelenchoides | Aphelenchoides besseyi | |
| 31521445 | 31521445 | PRJNA1093008_S_NODE_71676_length_262_cov_2.740741_g71349_i0 | PRJNA1093008 | 71676 | 262 | 2.740741 | 7.18074142 | Cylicocyclus nassatus | 53992 | Nematoda | Nematoda | 85.1 | 5.88e-17 | NR | CAJ0595929.1 | 53992 | g71349 | i0 | 44.3 | 0.904580152671756 | 79 | 44 | 90.5 | 0 | 2 | 238 | 355 | 433 | CAJ0595929.1 unnamed protein product [Cylicocyclus nassatus] | diamond | 237 | 85.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongylidae | Cylicocyclus | Cylicocyclus nassatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;