RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA1093008" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1093008 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12952124 12952124 PRJNA1093008_S_NODE_12191_length_422_cov_2.538682_g11865_i0 PRJNA1093008 12191 422 2.538682 10.71323804 root 1 Root_unresolved Root_unresolved 114 2.9500000000000003e-27   NR XP_022322533.1 6565 g11865 i0 48.4 1.77725118483412 126 54 83.9 4 421 68 243 365 XP_022322533.1 protein SGT1 homolog [Crassostrea virginica] diamond 750 115 0.991304347826087 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
27541622 27541622 PRJNA1093008_S_NODE_36704_length_321_cov_0.915323_g36377_i0 PRJNA1093008 36704 321 0.915323 2.93818683 Sinanodonta woodiana 1069815 Mollusca Mollusca 96.3 1.03e-21   NR KAL3886275.1 1069815 g36377 i0 74.6 3.30841121495327 59 15 55.1 0 288 112 192 250 KAL3886275.1 hypothetical protein ACJMK2_026282 [Sinanodonta woodiana] diamond 1062 96.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Sinanodonta Sinanodonta woodiana
27699747 27699747 PRJNA1093008_S_NODE_70584_length_264_cov_1.209424_g70257_i0 PRJNA1093008 70584 264 1.209424 3.19287936 Pinctada imbricata 66713 Mollusca Mollusca 53.1 1.02e-5   NR KAK3102618.1 66713 g70257 i0 37.4 4.11363636363636 91 52 97.7 1 2 259 30 120 KAK3102618.1 hypothetical protein FSP39_012698 [Pinctada imbricata] diamond 1086 53.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pterioida Pteriidae Pinctada Pinctada imbricata
27943479 27943479 PRJNA1093008_S_NODE_62605_length_274_cov_2.681592_g62278_i0 PRJNA1093008 62605 274 2.681592 7.34756208 Metazoa 33208 Mollusca Mollusca 56.2 9.59e-7   NR XP_021348650.1 6573 g62278 i0 66.7 7.12773722627737 39 13 42.7 0 117 1 465 503 XP_021348650.1 WD40 repeat-containing protein SMU1 [Mizuhopecten yessoensis] diamond 1953 56.6 0.992932862190813 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
28141688 28141688 PRJNA1093008_S_NODE_66345_length_269_cov_2.357143_g66018_i0 PRJNA1093008 66345 269 2.357143 6.34071467 Dreissena polymorpha 45954 Mollusca Mollusca 47 0.00161   NR XP_052221657.1 45954 g66018 i0 36.9 4.29368029739777 65 33 72.5 1 3 197 431 487 XP_052221657.1 zinc finger BED domain-containing protein 4-like [Dreissena polymorpha] diamond 1155 47 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
28709957 28709957 PRJNA1093008_S_NODE_82967_length_250_cov_1.299435_g82640_i0 PRJNA1093008 82967 250 1.299435 3.2485875 Littorina saxatilis 31220 Mollusca Mollusca 43.5 0.0182   NR KAK7105128.1 31220 g82640 i0 48.7 0.852 39 17 46.8 1 125 241 187 222 KAK7105128.1 hypothetical protein V1264_019730 [Littorina saxatilis] diamond 213 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
29909796 29909796 PRJNA1093008_S_NODE_98231_length_234_cov_3.757764_g97904_i0 PRJNA1093008 98231 234 3.757764 8.79316776 Ruditapes philippinarum 129788 Mollusca Mollusca 62 5.24e-9   NR XP_060597076.1 129788 g97904 i0 53.4 0.743589743589744 58 26 73.1 1 47 217 24 81 XP_060597076.1 uncharacterized protein LOC132750994 isoform X1 [Ruditapes philippinarum] diamond 174 62 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
30375366 30375366 PRJNA1093008_S_NODE_39472_length_314_cov_3.136929_g39145_i0 PRJNA1093008 39472 314 3.136929 9.84995706 root 1 Root_unresolved Root_unresolved 51.6 6.85e-5   NR KAK3105572.1 66713 g39145 i0 34.7 2.65605095541401 72 42 64 2 269 69 181 252 KAK3105572.1 hypothetical protein FSP39_000853 [Pinctada imbricata] diamond 834 52 0.992307692307692 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pterioida Pteriidae Pinctada Pinctada imbricata
30627504 30627504 PRJNA1093008_S_NODE_73153_length_260_cov_7.759358_g72826_i0 PRJNA1093008 73153 260 7.759358 20.1743308 Metazoa 33208 Mollusca Mollusca 50.1 1.18e-4   NR OWF51016.1 6573 g72826 i0 96.2 57.3 26 1 30 0 1 78 505 530 OWF51016.1 Tubulin alpha-1A chain [Mizuhopecten yessoensis] diamond 14898 50.4 0.994047619047619 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
31164507 31164507 PRJNA1093008_S_NODE_98995_length_232_cov_2.251572_g98668_i0 PRJNA1093008 98995 232 2.251572 5.22364704 Metazoa 33208 Mollusca Mollusca 88.6 1.47e-19   NR XP_046356566.1 6454 g98668 i0 92.5 22.3836206896552 40 3 51.7 0 70 189 103 142 XP_046356566.1 polyadenylate-binding protein 2-B-like [Haliotis rufescens] diamond 5193 88.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
31354612 31354612 PRJNA1093008_S_NODE_59196_length_279_cov_2.354369_g58869_i0 PRJNA1093008 59196 279 2.354369 6.56868951 Elysia 71493 Mollusca Mollusca 72.8 6.77e-14   NR KAK3697589.1 231223 g58869 i0 65.4 3.35483870967742 52 18 55.9 0 278 123 91 142 KAK3697589.1 hypothetical protein RRG08_033319 [Elysia crispata] diamond 936 73.2 0.994535519125683 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia crispata
32027499 32027499 PRJNA1093008_S_NODE_25678_length_351_cov_2.956835_g25351_i0 PRJNA1093008 25678 351 2.956835 10.37849085 Saccostrea cuccullata 36930 Mollusca Mollusca 45.1 0.0183   NR XP_062582245.1 36930 g25351 i0 45.5 2.11111111111111 55 27 44.4 1 186 341 426 480 XP_062582245.1 uncharacterized protein LOC134244011 [Saccostrea cuccullata] diamond 741 45.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;