RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1093008" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1093008 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4025598 4025598 PRJNA1093008_S_NODE_89664_length_245_cov_1.645349_g89337_i0 PRJNA1093008 89664 245 1.645349 4.03110505 Naegleria 5761 Heterolobosea other_Eukaryota 72 9.01e-13   NR XP_002683047.1 5762 g89337 i0 43.8 2.70612244897959 73 41 89.4 0 220 2 201 273 XP_002683047.1 uncharacterized protein NAEGRDRAFT_29313 [Naegleria gruberi] diamond 663 72.4 0.994475138121547 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27193906 27193906 PRJNA1093008_S_NODE_60302_length_278_cov_1.126829_g59975_i0 PRJNA1093008 60302 278 1.126829 3.13258462 Acrasis kona 1008807 Heterolobosea other_Eukaryota 98.6 2.09e-24   NR KAL0480411.1 1008807 g59975 i0 66.7 0.971223021582734 90 25 91.7 1 263 9 12 101 KAL0480411.1 ribosomal protein L36 [Acrasis kona] diamond 270 98.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;