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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA1093008" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 31 ✖

bioproject 1

  • PRJNA1093008 · 31 ✖

analysis 1

  • diamond · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1472993 1472993 PRJNA1093008_S_NODE_18242_length_383_cov_1.241935_g17915_i0 PRJNA1093008 18242 383 1.241935 4.75661105 Lolium multiflorum 4521 Plants Plants 131 6.29e-34   NR KAK1613684.1 4521 g17915 i0 80 0.587467362924282 75 14 58 1 162 383 5 79 KAK1613684.1 hypothetical protein QYE76_019201 [Lolium multiflorum] diamond 225 131 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium multiflorum
4025241 4025241 PRJNA1093008_S_NODE_48184_length_297_cov_2.062500_g47857_i0 PRJNA1093008 48184 297 2.0625 6.125625 Olea europaea subsp. europaea 158383 Plants Plants 114 3.3499999999999996e-31   NR CAA2964041.1 158383 g47857 i0 92.6 0.686868686868687 68 5 68.7 0 232 29 1 68 CAA2964041.1 arabinogalactan peptide 20 [Olea europaea subsp. europaea] diamond 204 114 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea
20599564 20599564 PRJNA1093008_S_NODE_35737_length_323_cov_1.508000_g35410_i0 PRJNA1093008 35737 323 1.508 4.87084 Eukaryota 2759 Plants Plants 139 6.98e-38   NR KAL3604014.1 43335 g35410 i0 75 45.2879256965944 84 21 78 0 3 254 36 119 KAL3604014.1 hypothetical protein D5086_004873 [Populus alba] diamond 14628 140 0.992857142857143 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Populus Populus alba
27067501 27067501 PRJNA1093008_S_NODE_72822_length_261_cov_1.542553_g72495_i0 PRJNA1093008 72822 261 1.542553 4.02606333 Carpinus fangiana 176857 Plants Plants 94.7 2.5699999999999998e-23   NR KAE7997946.1 176857 g72495 i0 82.6 0.528735632183908 46 8 52.9 0 257 120 37 82 KAE7997946.1 hypothetical protein FH972_002532 [Carpinus fangiana] diamond 138 94.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Carpinus Carpinus fangiana
27162185 27162185 PRJNA1093008_S_NODE_65102_length_271_cov_1.555556_g64775_i0 PRJNA1093008 65102 271 1.555556 4.21555676 Arctium lappa 4217 Plants Plants 43.5 0.0193   NR KAI3746669.1 4217 g64775 i0 65.4 0.287822878228782 26 9 28.8 0 2 79 67 92 KAI3746669.1 hypothetical protein L6452_09108 [Arctium lappa] diamond 78 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Arctium Arctium lappa
27375398 27375398 PRJNA1093008_S_NODE_64943_length_271_cov_1.944444_g64616_i0 PRJNA1093008 64943 271 1.944444 5.26944324 Magnoliopsida 3398 Plants Plants 94 5e-20   NR XP_002519025.1 3988 g64616 i0 59.5 60.7306273062731 74 26 77.5 1 270 61 349 422 XP_002519025.1 splicing factor 3B subunit 2 [Ricinus communis] diamond 16458 94 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Euphorbiaceae Ricinus Ricinus communis
27762842 27762842 PRJNA1093008_S_NODE_89524_length_245_cov_1.790698_g89197_i0 PRJNA1093008 89524 245 1.790698 4.3872101 Cryptomeria japonica 3369 Plants Plants 66.2 3.75e-11   NR XP_057833320.2 3369 g89197 i0 55.7 1.73877551020408 70 30 84.5 1 232 26 12 81 XP_057833320.2 uncharacterized protein LOC131044070 [Cryptomeria japonica] diamond 426 66.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
28204416 28204416 PRJNA1093008_S_NODE_93986_length_242_cov_1.366864_g93659_i0 PRJNA1093008 93986 242 1.366864 3.30781088 Macadamia integrifolia 60698 Plants Plants 43.5 0.0204   NR XP_042483073.1 60698 g93659 i0 44.7 1.16528925619835 47 26 58.3 0 96 236 1404 1450 XP_042483073.1 uncharacterized protein LOC122063429 [Macadamia integrifolia] diamond 282 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Proteaceae Macadamia Macadamia integrifolia
28299245 28299245 PRJNA1093008_S_NODE_16726_length_391_cov_1.452830_g16400_i0 PRJNA1093008 16726 391 1.45283 5.6805653 Taxus chinensis 29808 Plants Plants 70.5 4.07e-11   NR KAH9317323.1 29808 g16400 i0 68.8 1.50383631713555 48 15 36.8 0 245 388 1115 1162 KAH9317323.1 hypothetical protein KI387_019092 [Taxus chinensis] diamond 588 70.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Taxaceae Taxus Taxus chinensis
28299250 28299250 PRJNA1093008_S_NODE_67866_length_267_cov_2.381443_g67539_i0 PRJNA1093008 67866 267 2.381443 6.35845281 Forsythia ovata 205694 Plants Plants 49.3 9.63e-5   NR KAL2548042.1 205694 g67539 i0 48.9 1.14606741573034 47 17 52.8 1 263 123 27 66 KAL2548042.1 Rapid ALkalinization Factor [Forsythia ovata] diamond 306 49.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Forsythia Forsythia ovata
28393960 28393960 PRJNA1093008_S_NODE_49826_length_294_cov_2.167421_g49499_i0 PRJNA1093008 49826 294 2.167421 6.37221774 Fraxinus pennsylvanica 56036 Plants Plants 159 6.99e-45   NR CAI9761477.1 56036 g49499 i0 81.1 2.90816326530612 95 18 96.9 0 293 9 5 99 CAI9761477.1 unnamed protein product [Fraxinus pennsylvanica] diamond 855 159 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Fraxinus Fraxinus pennsylvanica
28583647 28583647 PRJNA1093008_S_NODE_66047_length_270_cov_1.172589_g65720_i0 PRJNA1093008 66047 270 1.172589 3.1659903 Forsythia ovata 205694 Plants Plants 57.8 9.29e-8   NR KAL2548041.1 205694 g65720 i0 55.4 1.24444444444444 56 16 60 2 268 107 18 66 KAL2548041.1 Rapid ALkalinization Factor [Forsythia ovata] diamond 336 57.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Forsythia Forsythia ovata
28741353 28741353 PRJNA1093008_S_NODE_25847_length_351_cov_1.187050_g25520_i0 PRJNA1093008 25847 351 1.18705 4.1665455 Hordeum vulgare 4513 Plants Plants 43.9 0.0382   NR KAI4991816.1 4513 g25520 i0 58.7 0.393162393162393 46 17 38.5 2 3 137 21 65 KAI4991816.1 hypothetical protein ZWY2020_040202 [Hordeum vulgare] diamond 138 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
28867621 28867621 PRJNA1093008_S_NODE_31948_length_332_cov_4.061776_g31621_i0 PRJNA1093008 31948 332 4.061776 13.48509632 Lupinus albus 3870 Plants Plants 102 7.22e-23   NR KAF1871354.1 3870 g31621 i0 54.5 4.75301204819277 88 39 79.5 1 330 67 448 534 KAF1871354.1 hypothetical protein Lal_00020147 [Lupinus albus] diamond 1578 102 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lupinus Lupinus albus
28899048 28899048 PRJNA1093008_S_NODE_81728_length_251_cov_1.073034_g81401_i0 PRJNA1093008 81728 251 1.073034 2.69331534 Erythroxylum novogranatense 1862640 Plants Plants 42.7 0.0415   NR KAJ8771956.1 1862640 g81401 i0 61.1 0.430278884462151 36 11 39.4 1 145 243 13 48 KAJ8771956.1 hypothetical protein K2173_027133 [Erythroxylum novogranatense] diamond 108 42.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Erythroxylaceae Erythroxylum Erythroxylum novogranatense
29309631 29309631 PRJNA1093008_S_NODE_96669_length_240_cov_2.119760_g96342_i0 PRJNA1093008 96669 240 2.11976 5.087424 Corylus avellana 13451 Plants Plants 43.1 0.0266   NR XP_059435759.1 13451 g96342 i0 37.7 1.9375 77 32 78.8 5 9 197 1388 1462 XP_059435759.1 zinc finger CCCH domain-containing protein 44 [Corylus avellana] diamond 465 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Corylus Corylus avellana
29499065 29499065 PRJNA1093008_S_NODE_29490_length_339_cov_3.338346_g29163_i0 PRJNA1093008 29490 339 3.338346 11.31699294 Adiantum capillus-veneris 13818 Plants Plants 165 1.43e-44   NR KAI5058559.1 13818 g29163 i0 68.4 3.02654867256637 114 35 100 1 339 1 330 443 KAI5058559.1 hypothetical protein GOP47_0026729 [Adiantum capillus-veneris] diamond 1026 165 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Adiantum Adiantum capillus-veneris
29656588 29656588 PRJNA1093008_S_NODE_41330_length_310_cov_3.603376_g41003_i0 PRJNA1093008 41330 310 3.603376 11.1704656 Cryptomeria japonica 3369 Plants Plants 85.1 2.65e-18   NR XP_057833826.1 3369 g41003 i0 73.2 0.541935483870968 56 15 54.2 0 2 169 100 155 XP_057833826.1 oleosin G [Cryptomeria japonica] diamond 168 85.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
29688270 29688270 PRJNA1093008_S_NODE_22110_length_365_cov_1.582192_g21783_i0 PRJNA1093008 22110 365 1.582192 5.7750008 Morella rubra 262757 Plants Plants 49.7 1.38e-4   NR KAB1206969.1 262757 g21783 i0 47.4 0.624657534246575 76 29 53.4 2 361 167 18 93 KAB1206969.1 hypothetical protein CJ030_MR7G008115 [Morella rubra] diamond 228 49.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Myricaceae Morella Morella rubra
30036050 30036050 PRJNA1093008_S_NODE_86131_length_248_cov_0.880000_g85804_i0 PRJNA1093008 86131 248 0.88 2.1824 Carya illinoinensis 32201 Plants Plants 42.7 0.0316   NR KAG2674229.1 32201 g85804 i0 35.9 0.774193548387097 64 28 62.9 3 224 69 133 195 KAG2674229.1 hypothetical protein I3760_13G124800 [Carya illinoinensis] diamond 192 42.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Juglandaceae Carya Carya illinoinensis
30162154 30162154 PRJNA1093008_S_NODE_62192_length_275_cov_1.524752_g61865_i0 PRJNA1093008 62192 275 1.524752 4.193068 Capsella rubella 81985 Plants Plants 43.5 0.0302   NR XP_006300589.1 81985 g61865 i0 30.1 1.12363636363636 103 56 96 3 274 11 375 476 XP_006300589.1 DNA ligase 6 [Capsella rubella] diamond 309 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Capsella Capsella rubella
30216820 30216820 PRJNA1093008_S_NODE_20292_length_372_cov_8.535117_g19965_i0 PRJNA1093008 20292 372 8.535117 31.75063524 Magnoliopsida 3398 Plants Plants 53.5 1.18e-5   NR ESR38196.1 85681 g19965 i0 62.5 1.70161290322581 32 12 25.8 0 275 370 24 55 ESR38196.1 hypothetical protein CICLE_v10030158mg [Citrus x clementina] diamond 633 53.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus x clementina
30320890 30320890 PRJNA1093008_S_NODE_15772_length_396_cov_2.851393_g15446_i0 PRJNA1093008 15772 396 2.851393 11.29151628 Zea mays 4577 Plants Plants 54.3 3.03e-6   NR NP_001334938.1 4577 g15446 i0 71.7 0.454545454545455 60 17 45.5 0 214 35 56 115 NP_001334938.1 uncharacterized protein LOC100501446 [Zea mays] diamond 180 54.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
30604637 30604637 PRJNA1093008_S_NODE_27533_length_345_cov_2.448529_g27206_i0 PRJNA1093008 27533 345 2.448529 8.44742505 Trifolium medium 97028 Plants Plants 47.8 0.00152   NR MCI04999.1 97028 g27206 i0 67.7 3.45217391304348 31 10 27 0 257 165 159 189 MCI04999.1 transposon TF2-1 polyprotein [Trifolium medium] diamond 1191 47.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Trifolium Trifolium medium
30667888 30667888 PRJNA1093008_S_NODE_48893_length_296_cov_1.381166_g48566_i0 PRJNA1093008 48893 296 1.381166 4.08825136 Alopecurus aequalis 114194 Plants Plants 89.4 2.8e-20   NR CAM0914082.1 114194 g48566 i0 83.6 0.618243243243243 61 10 61.8 0 1 183 82 142 CAM0914082.1 unnamed protein product [Alopecurus aequalis] diamond 183 89.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Alopecurus Alopecurus aequalis
30762790 30762790 PRJNA1093008_S_NODE_41974_length_309_cov_1.872881_g41647_i0 PRJNA1093008 41974 309 1.872881 5.78720229 Vigna umbellata 87088 Plants Plants 43.5 0.0402   NR XP_047162885.1 87088 g41647 i0 43.9 0.398058252427184 41 23 39.8 0 202 80 227 267 XP_047162885.1 uncharacterized protein LOC124832671 [Vigna umbellata] diamond 123 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vigna Vigna umbellata
30857414 30857414 PRJNA1093008_S_NODE_73914_length_260_cov_1.016043_g73587_i0 PRJNA1093008 73914 260 1.016043 2.6417118 Sesamum alatum 300844 Plants Plants 43.9 0.0173   NR KAK4424621.1 300844 g73587 i0 46.5 1.53461538461538 43 23 49.6 0 154 26 92 134 KAK4424621.1 hypothetical protein Salat_1655700 [Sesamum alatum] diamond 399 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Pedaliaceae Sesamum Sesamum alatum
31015459 31015459 PRJNA1093008_S_NODE_59755_length_278_cov_3.292683_g59428_i0 PRJNA1093008 59755 278 3.292683 9.15365874 Alopecurus aequalis 114194 Plants Plants 55.1 7.39e-7   NR CAM0912352.1 114194 g59428 i0 57.4 0.658273381294964 61 25 64.7 1 2 181 105 165 CAM0912352.1 unnamed protein product [Alopecurus aequalis] diamond 183 55.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Alopecurus Alopecurus aequalis
32027498 32027498 PRJNA1093008_S_NODE_24578_length_355_cov_2.482270_g24251_i0 PRJNA1093008 24578 355 2.48227 8.8120585 Liquidambar formosana 63359 Plants Plants 55.8 3.29e-6   NR KAK9277680.1 63359 g24251 i0 33.3 1.37746478873239 90 53 71 3 329 78 507 595 KAK9277680.1 hypothetical protein L1049_007227 [Liquidambar formosana] diamond 489 55.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Saxifragales Altingiaceae Liquidambar Liquidambar formosana
32461876 32461876 PRJNA1093008_S_NODE_42859_length_307_cov_1.974359_g42532_i0 PRJNA1093008 42859 307 1.974359 6.06128213 Magnoliopsida 3398 Plants Plants 56.6 1.07e-6   NR AQK88950.1 4577 g42532 i0 61.5 12.7915309446254 39 15 38.1 0 300 184 48 86 AQK88950.1 DNA damage-binding protein 1a, partial [Zea mays] diamond 3927 56.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
32565645 32565645 PRJNA1093008_S_NODE_49299_length_295_cov_2.018018_g48972_i0 PRJNA1093008 49299 295 2.018018 5.9531531 Olea europaea subsp. europaea 158383 Plants Plants 48.1 1.91e-4   NR CAA2997844.1 158383 g48972 i0 81.5 0.274576271186441 27 5 27.5 0 3 83 72 98 CAA2997844.1 NIM1-INTERACTING 1-like [Olea europaea subsp. europaea] diamond 81 48.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;