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contig_metadata

43 rows where analysis = "diamond", bioproject = "PRJNA1092581" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 43 ✖

bioproject 1

  • PRJNA1092581 · 43 ✖

analysis 1

  • diamond · 43 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
195776 195776 PRJNA1092581_P_NODE_111301_length_238_cov_2.545455_g110768_i0 PRJNA1092581 111301 238 2.545455 6.0581829 archaeon 1906665 Archaea Archaea 75.1 1.42e-13   NR RYH05590.1 1906665 g110768 i0 45.9 0.932773109243697 74 40 93.3 0 7 228 336 409 RYH05590.1 MAG: hypothetical protein EON65_44275, partial [archaeon] diamond 222 75.1 1 Archaea               archaeon
2748575 2748575 PRJNA1092581_P_NODE_78023_length_293_cov_6.427273_g77490_i0 PRJNA1092581 78023 293 6.427273 18.83190989 archaeon 1906665 Archaea Archaea 152 1.42e-41   NR RYH28467.1 1906665 g77490 i0 84.5 0.860068259385666 84 13 86 0 26 277 339 422 RYH28467.1 MAG: ABC-F family ATP-binding cassette domain-containing protein [archaeon] diamond 252 152 1 Archaea               archaeon
15500401 15500401 PRJNA1092581_P_NODE_7473_length_964_cov_6.093154_g7096_i0 PRJNA1092581 7473 964 6.093154 58.73800456 archaeon 1906665 Archaea Archaea 312 4.37e-102   NR NCP98207.1 1906665 g7096 i0 64.3 0.715767634854772 230 81 71.6 1 692 3 3 231 NCP98207.1 DNA cytosine methyltransferase [archaeon] diamond 690 312 1 Archaea               archaeon
18048721 18048721 PRJNA1092581_P_NODE_47235_length_393_cov_2.821875_g46702_i0 PRJNA1092581 47235 393 2.821875 11.08996875 root 1 Root_unresolved Root_unresolved 114 3.13e-27   NR RYH31491.1 1906665 g46702 i0 58.8 4.32824427480916 114 40 86.3 3 374 36 264 371 RYH31491.1 MAG: orotate phosphoribosyltransferase [archaeon] diamond 1701 115 0.991304347826087 Archaea               archaeon
26750647 26750647 PRJNA1092581_P_NODE_107821_length_243_cov_1.711765_g107288_i0 PRJNA1092581 107821 243 1.711765 4.15958895 archaeon 1906665 Archaea Archaea 50.8 1.98e-5   NR RYH29539.1 1906665 g107288 i0 41.5 0.654320987654321 53 31 65.4 0 173 15 38 90 RYH29539.1 MAG: hypothetical protein EON65_08145 [archaeon] diamond 159 50.8 1 Archaea               archaeon
26782913 26782913 PRJNA1092581_P_NODE_4001_length_1205_cov_7.934629_g3755_i0 PRJNA1092581 4001 1205 7.934629 95.61227945 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 126 1.01e-29   NR MFA5071249.1 2026773 g3755 i0 44.4 0.331120331950207 133 70 33.1 1 23 421 124 252 MFA5071249.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 399 126 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
26878007 26878007 PRJNA1092581_P_NODE_83901_length_281_cov_2.504808_g83368_i0 PRJNA1092581 83901 281 2.504808 7.03851048 archaeon 1906665 Archaea Archaea 76.6 7.78e-15   NR NCP98129.1 1906665 g83368 i0 52.2 0.736654804270463 69 31 73.7 1 13 219 16 82 NCP98129.1 hypothetical protein [archaeon] diamond 207 76.6 1 Archaea               archaeon
27193866 27193866 PRJNA1092581_P_NODE_118762_length_225_cov_89.309211_g118229_i0 PRJNA1092581 118762 225 89.309211 200.94572475 Haloplanus aerogenes 660522 Archaea Archaea 50.4 5.06e-5   NR WP_121921892.1 660522 g118229 i0 73.5 0.453333333333333 34 9 45.3 0 27 128 260 293 WP_121921892.1 ABC transporter permease [Haloplanus aerogenes] diamond 102 50.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus aerogenes
27375393 27375393 PRJNA1092581_P_NODE_70423_length_312_cov_1.790795_g69890_i0 PRJNA1092581 70423 312 1.790795 5.5872804 Methanobacteriati 3366610 Archaea Archaea 57 6.81e-7   NR MBT4346542.1 2026739 g69890 i0 52.4 1.21153846153846 42 18 38.5 1 101 220 181 222 MBT4346542.1 hypothetical protein [Methanobacteriota archaeon] diamond 378 57 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27541609 27541609 PRJNA1092581_P_NODE_72644_length_306_cov_3.347639_g72111_i0 PRJNA1092581 72644 306 3.347639 10.24377534 Methanosarcina sp. 2213 Archaea Archaea 46.2 0.00174   NR HET8686735.1 2213 g72111 i0 52.1 0.470588235294118 48 18 47.1 2 49 192 72 114 HET8686735.1 hypothetical protein [Methanosarcina sp.] diamond 144 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
27573109 27573109 PRJNA1092581_P_NODE_47744_length_390_cov_10.447950_g47211_i0 PRJNA1092581 47744 390 10.44795 40.747005 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 196 2.539999999999999e-55   NR MEM2002060.1 3058293 g47211 i0 68.5 0.953846153846154 124 38 94.6 1 381 13 665 788 MEM2002060.1 RNase H-like domain-containing protein [Candidatus Methanomethylicaceae archaeon] diamond 372 196 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
27604846 27604846 PRJNA1092581_P_NODE_49444_length_383_cov_3.170968_g48911_i0 PRJNA1092581 49444 383 3.170968 12.14480744 archaeon 1906665 Archaea Archaea 53.5 3.09e-5   NR RYH29802.1 1906665 g48911 i0 55.2 0.454308093994778 58 23 43.1 1 186 22 7 64 RYH29802.1 MAG: hypothetical protein EON65_07260 [archaeon] diamond 174 53.5 1 Archaea               archaeon
27731280 27731280 PRJNA1092581_P_NODE_44144_length_409_cov_1.863095_g43611_i0 PRJNA1092581 44144 409 1.863095 7.62005855 archaeon 1906665 Archaea Archaea 67 6.25e-10   NR NCP98211.1 1906665 g43611 i0 31.8 0.946210268948655 129 80 94.6 3 404 18 257 377 NCP98211.1 hypothetical protein [archaeon] diamond 387 67 1 Archaea               archaeon
28141655 28141655 PRJNA1092581_P_NODE_119485_length_223_cov_11.886667_g118952_i0 PRJNA1092581 119485 223 11.886667 26.50726741 Methanobacteriota archaeon 2026739 Archaea Archaea 115 1.14e-28   NR MCH7660716.1 2026739 g118952 i0 73.5 0.914798206278027 68 18 91.5 0 215 12 283 350 MCH7660716.1 hypothetical protein [Methanobacteriota archaeon] diamond 204 115 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28425728 28425728 PRJNA1092581_P_NODE_93446_length_263_cov_4.721053_g92913_i0 PRJNA1092581 93446 263 4.721053 12.41636939 archaeon 1906665 Archaea Archaea 81.6 1.11e-16   NR HOW29897.1 1906665 g92913 i0 43.4 0.946768060836502 83 44 94.7 1 255 7 139 218 HOW29897.1 class I SAM-dependent methyltransferase [archaeon] diamond 249 81.6 1 Archaea               archaeon
28552060 28552060 PRJNA1092581_P_NODE_68467_length_317_cov_2.368852_g67934_i0 PRJNA1092581 68467 317 2.368852 7.50926084 archaeon 1906665 Archaea Archaea 132 1.75e-34   NR RYY86186.1 1906665 g67934 i0 68.8 0.908517350157729 96 28 90.9 2 20 307 67 160 RYY86186.1 MAG: CocE/NonD family hydrolase [archaeon] diamond 288 132 1 Archaea               archaeon
28678339 28678339 PRJNA1092581_P_NODE_25747_length_548_cov_2.917895_g25219_i0 PRJNA1092581 25747 548 2.917895 15.9900646 archaeon 1906665 Archaea Archaea 237 4.24e-76   NR NCQ52220.1 1906665 g25219 i0 63.9 0.985401459854015 180 64 98 1 3 539 23 202 NCQ52220.1 dTMP kinase [archaeon] diamond 540 237 1 Archaea               archaeon
28678362 28678362 PRJNA1092581_P_NODE_78687_length_292_cov_2.849315_g78154_i0 PRJNA1092581 78687 292 2.849315 8.3199998 archaeon 1906665 Archaea Archaea 97.4 3.659999999999999e-23   NR NCP98210.1 1906665 g78154 i0 48.8 0.883561643835616 86 44 88.4 0 292 35 58 143 NCP98210.1 transcription termination/antitermination protein NusG [archaeon] diamond 258 97.4 1 Archaea               archaeon
28867592 28867592 PRJNA1092581_P_NODE_35228_length_464_cov_2.240409_g34696_i0 PRJNA1092581 35228 464 2.240409 10.39549776 archaeon 1906665 Archaea Archaea 94 1.02e-19   NR NCQ52218.1 1906665 g34696 i0 42.6 0.65301724137931 101 54 65.3 1 15 317 211 307 NCQ52218.1 hypothetical protein [archaeon] diamond 303 94 1 Archaea               archaeon
29088729 29088729 PRJNA1092581_P_NODE_120568_length_220_cov_5.823129_g120035_i0 PRJNA1092581 120568 220 5.823129 12.8108838 archaeon 1906665 Archaea Archaea 55.8 5.34e-7   NR NCP98219.1 1906665 g120035 i0 34.7 0.981818181818182 72 34 98.2 2 2 217 133 191 NCP98219.1 hypothetical protein [archaeon] diamond 216 55.8 1 Archaea               archaeon
29183563 29183563 PRJNA1092581_P_NODE_44349_length_407_cov_142.511976_g43816_i0 PRJNA1092581 44349 407 142.511976 580.02374232 archaeon 1906665 Archaea Archaea 55.1 8.58e-6   NR RYH23995.1 1906665 g43816 i0 37.5 0.58968058968059 80 50 59 0 318 79 16 95 RYH23995.1 MAG: hypothetical protein EON65_17225 [archaeon] diamond 240 55.1 1 Archaea               archaeon
29277929 29277929 PRJNA1092581_P_NODE_53769_length_364_cov_7.731959_g53236_i0 PRJNA1092581 53769 364 7.731959 28.14433076 Nitrososphaerales archaeon 2268197 Archaea Archaea 127 2.91e-31   NR HEY6282667.1 2268197 g53236 i0 54.6 1.78846153846154 108 49 89 0 21 344 355 462 HEY6282667.1 RNase H-like domain-containing protein [Nitrososphaerales archaeon] diamond 651 127 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
29372826 29372826 PRJNA1092581_P_NODE_113449_length_234_cov_4.385093_g112916_i0 PRJNA1092581 113449 234 4.385093 10.26111762 Nitrososphaera sp. 1971748 Archaea Archaea 74.7 1.83e-13   NR HEY9406945.1 1971748 g112916 i0 89.1 0.58974358974359 46 5 59 0 73 210 402 447 HEY9406945.1 multicopper oxidase domain-containing protein [Nitrososphaera sp.] diamond 138 74.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
29530741 29530741 PRJNA1092581_P_NODE_40230_length_431_cov_3.128492_g39697_i0 PRJNA1092581 40230 431 3.128492 13.48380052 archaeon 1906665 Archaea Archaea 65.9 1.78e-9   NR RYH30084.1 1906665 g39697 i0 55.8 0.299303944315545 43 19 29.9 0 158 30 2 44 RYH30084.1 MAG: hypothetical protein EON65_06375 [archaeon] diamond 129 65.9 1 Archaea               archaeon
29688246 29688246 PRJNA1092581_P_NODE_55590_length_358_cov_2.126316_g55057_i0 PRJNA1092581 55590 358 2.126316 7.61221128 Nitrososphaerota archaeon 2026795 Archaea Archaea 84 4.64e-17   NR MDG7000370.1 2026795 g55057 i0 58.5 2.19553072625698 65 27 54.5 0 163 357 3 67 MDG7000370.1 hypothetical protein [Nitrososphaerota archaeon] diamond 786 84 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29846480 29846480 PRJNA1092581_P_NODE_86931_length_275_cov_2.415842_g86398_i0 PRJNA1092581 86931 275 2.415842 6.6435655 archaeon 1906665 Archaea Archaea 140 2.2399999999999998e-38   NR NCQ51808.1 1906665 g86398 i0 70.8 0.970909090909091 89 26 97.1 0 8 274 131 219 NCQ51808.1 hypothetical protein [archaeon] diamond 267 140 1 Archaea               archaeon
30383948 30383948 PRJNA1092581_P_NODE_61053_length_339_cov_3.063910_g60520_i0 PRJNA1092581 61053 339 3.06391 10.3866549 archaeon 1906665 Archaea Archaea 54.3 9.71e-6   NR RYH24037.1 1906665 g60520 i0 45.5 0.48672566371681403 55 30 48.7 0 1 165 422 476 RYH24037.1 MAG: hypothetical protein EON65_17125 [archaeon] diamond 165 54.3 1 Archaea               archaeon
30446897 30446897 PRJNA1092581_P_NODE_124313_length_209_cov_4.500000_g123780_i0 PRJNA1092581 124313 209 4.5 9.405 archaeon 1906665 Archaea Archaea 48.1 1.27e-4   NR MDP2438463.1 1906665 g123780 i0 77.8 0.77511961722488 27 6 38.8 0 23 103 131 157 MDP2438463.1 MC/SLC25 family protein [archaeon] diamond 162 48.1 1 Archaea               archaeon
30509871 30509871 PRJNA1092581_P_NODE_106153_length_245_cov_1.616279_g105620_i0 PRJNA1092581 106153 245 1.616279 3.95988355 archaeon 1906665 Archaea Archaea 90.5 5.87e-19   NR RYH10050.1 1906665 g105620 i0 54.3 0.991836734693878 81 37 99.2 0 3 245 206 286 RYH10050.1 MAG: rhomboid family intramembrane serine protease [archaeon] diamond 243 90.5 1 Archaea               archaeon
30509902 30509902 PRJNA1092581_P_NODE_66133_length_323_cov_6.160000_g65600_i0 PRJNA1092581 66133 323 6.16 19.8968 archaeon 1906665 Archaea Archaea 105 5.15e-26   NR RYH05418.1 1906665 g65600 i0 55.7 0.900928792569659 97 43 90.1 0 14 304 93 189 RYH05418.1 MAG: hypothetical protein EON65_44735 [archaeon] diamond 291 105 1 Archaea               archaeon
30794179 30794179 PRJNA1092581_P_NODE_56094_length_356_cov_2.416961_g55561_i0 PRJNA1092581 56094 356 2.416961 8.60438116 archaeon 1906665 Archaea Archaea 45.4 0.0125   NR RYH23225.1 1906665 g55561 i0 62.5 0.269662921348315 32 12 27 0 239 334 174 205 RYH23225.1 MAG: hypothetical protein EON65_18110 [archaeon] diamond 96 45.4 1 Archaea               archaeon
30825817 30825817 PRJNA1092581_P_NODE_7394_length_968_cov_4.919553_g7020_i0 PRJNA1092581 7394 968 4.919553 47.62127304 archaeon 1906665 Archaea Archaea 73.6 3.24e-11   NR NCP98059.1 1906665 g7020 i0 35.4 0.306818181818182 99 62 30.7 1 324 620 94 190 NCP98059.1 hypothetical protein [archaeon] diamond 297 73.6 1 Archaea               archaeon
31015419 31015419 PRJNA1092581_P_NODE_19875_length_624_cov_4.627949_g19356_i0 PRJNA1092581 19875 624 4.627949 28.87840176 archaeon 1906665 Archaea Archaea 129 3.699999999999999e-32   NR RYH02490.1 1906665 g19356 i0 37 0.908653846153846 189 85 88.9 6 555 1 23 181 RYH02490.1 MAG: glycosyltransferase family 61 protein [archaeon] diamond 567 129 1 Archaea               archaeon
31268295 31268295 PRJNA1092581_P_NODE_24555_length_561_cov_6.557377_g24028_i0 PRJNA1092581 24555 561 6.557377 36.78688497 archaeon 1906665 Archaea Archaea 71.6 4.5e-11   NR RYY87161.1 1906665 g24028 i0 51.7 0.320855614973262 60 29 32.1 0 307 486 127 186 RYY87161.1 MAG: BspA family leucine-rich repeat surface protein [archaeon] diamond 180 71.6 1 Archaea               archaeon
31363315 31363315 PRJNA1092581_P_NODE_44576_length_406_cov_6.390390_g44043_i0 PRJNA1092581 44576 406 6.39039 25.9449834 archaeon 1906665 Archaea Archaea 47.4 0.00557   NR RYG69290.1 1906665 g44043 i0 38.9 0.399014778325123 54 33 39.9 0 85 246 2153 2206 RYG69290.1 MAG: hypothetical protein EON64_03095, partial [archaeon] diamond 162 47.4 1 Archaea               archaeon
31553204 31553204 PRJNA1092581_P_NODE_76896_length_296_cov_2.757848_g76363_i0 PRJNA1092581 76896 296 2.757848 8.16323008 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 145 5.81e-40   NR MDW0137090.1 2169593 g76363 i0 79.3 4.15540540540541 82 17 83.1 0 266 21 239 320 MDW0137090.1 polysaccharide deacetylase family protein [Nitrososphaeraceae archaeon] diamond 1230 145 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31584722 31584722 PRJNA1092581_P_NODE_127216_length_200_cov_4.377953_g126683_i0 PRJNA1092581 127216 200 4.377953 8.755906 archaeon 1906665 Archaea Archaea 126 1.54e-32   NR NCQ52296.1 1906665 g126683 i0 87.9 0.99 66 8 99 0 3 200 364 429 NCQ52296.1 ATP-binding protein [archaeon] diamond 198 126 1 Archaea               archaeon
31733890 31733890 PRJNA1092581_P_NODE_111757_length_237_cov_3.573171_g111224_i0 PRJNA1092581 111757 237 3.573171 8.46841527 Archaea 2157 Archaea Archaea 58.5 1.32e-8   NR MDC0149970.1 2163009 g111224 i0 33.3 3.79746835443038 75 50 94.9 0 1 225 46 120 MDC0149970.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 900 58.5 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
31805945 31805945 PRJNA1092581_P_NODE_33577_length_476_cov_4.533499_g33045_i0 PRJNA1092581 33577 476 4.533499 21.57945524 archaeon 1906665 Archaea Archaea 90.1 1.14e-17   NR RYG70150.1 1906665 g33045 i0 42.6 0.680672268907563 108 57 66.2 2 466 152 185 290 RYG70150.1 MAG: hypothetical protein EON64_00970 [archaeon] diamond 324 90.1 1 Archaea               archaeon
32113845 32113845 PRJNA1092581_P_NODE_40618_length_429_cov_1.429775_g40085_i0 PRJNA1092581 40618 429 1.429775 6.13373475 root 1 Root_unresolved Root_unresolved 219 4.859999999999998e-69   NR NCP98219.1 1906665 g40085 i0 71.2 1.94405594405594 139 40 97.2 0 12 428 1 139 NCP98219.1 hypothetical protein [archaeon] diamond 834 220 0.995454545454545 Archaea               archaeon
32407208 32407208 PRJNA1092581_P_NODE_52419_length_370_cov_3.518519_g51886_i0 PRJNA1092581 52419 370 3.518519 13.0185203 archaeon 1906665 Archaea Archaea 166 9.63e-47   NR NCQ52296.1 1906665 g51886 i0 69.4 0.981081081081081 121 37 98.1 0 367 5 203 323 NCQ52296.1 ATP-binding protein [archaeon] diamond 363 166 1 Archaea               archaeon
32533903 32533903 PRJNA1092581_P_NODE_98879_length_254_cov_7.856354_g98346_i0 PRJNA1092581 98879 254 7.856354 19.95513916 archaeon 1906665 Archaea Archaea 55.5 1.46e-6   NR RYH30189.1 1906665 g98346 i0 40.6 0.81496062992126 69 37 81.5 1 21 227 3147 3211 RYH30189.1 MAG: hypothetical protein EON65_05915 [archaeon] diamond 207 55.5 1 Archaea               archaeon
32691158 32691158 PRJNA1092581_P_NODE_66520_length_322_cov_4.791165_g65987_i0 PRJNA1092581 66520 322 4.791165 15.4275513 archaeon 1906665 Archaea Archaea 69.3 3.87e-11   NR NCQ52239.1 1906665 g65987 i0 47 0.773291925465838 83 44 77.3 0 278 30 115 197 NCQ52239.1 reverse transcriptase-like protein [archaeon] diamond 249 69.3 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;