contig_metadata
26 rows where analysis = "diamond", bioproject = "PRJNA1092581" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5300538 | 5300538 | PRJNA1092581_P_NODE_72825_length_305_cov_141.000000_g72292_i0 | PRJNA1092581 | 72825 | 305 | 141 | 430.05 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 159 | 1.94e-44 | NR | MFT4177135.1 | 1962973 | g72292 | i0 | 78.5 | 1.82950819672131 | 93 | 20 | 91.5 | 0 | 300 | 22 | 267 | 359 | MFT4177135.1 aminopeptidase P N-terminal domain-containing protein [Luteolibacter sp.] | diamond | 558 | 159 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 5300705 | 5300705 | PRJNA1092581_P_NODE_79585_length_290_cov_2.834101_g79052_i0 | PRJNA1092581 | 79585 | 290 | 2.834101 | 8.2188929 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 97.4 | 8.24e-23 | NR | WP_069962304.1 | 1838286 | g79052 | i0 | 61.7 | 0.972413793103448 | 94 | 26 | 93.1 | 2 | 290 | 21 | 28 | 115 | WP_069962304.1 flagellar basal body-associated FliL family protein [Lacunisphaera limnophila] | diamond | 282 | 97.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 26655811 | 26655811 | PRJNA1092581_P_NODE_23501_length_574_cov_5.113772_g22975_i0 | PRJNA1092581 | 23501 | 574 | 5.113772 | 29.35305128 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 61.6 | 1.24e-8 | NR | MCX8511623.1 | 2811408 | g22975 | i0 | 44.1 | 0.355400696864112 | 68 | 38 | 35.5 | 0 | 226 | 23 | 16 | 83 | MCX8511623.1 GIY-YIG nuclease family protein [Chthoniobacteraceae bacterium] | diamond | 204 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 26940889 | 26940889 | PRJNA1092581_P_NODE_118582_length_226_cov_2.718954_g118049_i0 | PRJNA1092581 | 118582 | 226 | 2.718954 | 6.14483604 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 72.8 | 1.06e-13 | NR | HEX8311414.1 | 2811408 | g118049 | i0 | 53.1 | 0.849557522123894 | 64 | 30 | 85 | 0 | 221 | 30 | 93 | 156 | HEX8311414.1 hypothetical protein [Chthoniobacteraceae bacterium] | diamond | 192 | 72.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 26972582 | 26972582 | PRJNA1092581_P_NODE_48962_length_385_cov_3.371795_g48429_i0 | PRJNA1092581 | 48962 | 385 | 3.371795 | 12.98141075 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 200 | 1.59e-60 | NR | MBS0629289.1 | 2026799 | g48429 | i0 | 79.3 | 0.942857142857143 | 121 | 25 | 94.3 | 0 | 22 | 384 | 1 | 121 | MBS0629289.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Verrucomicrobiota bacterium] | diamond | 363 | 200 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27257198 | 27257198 | PRJNA1092581_P_NODE_117823_length_227_cov_3.337662_g117290_i0 | PRJNA1092581 | 117823 | 227 | 3.337662 | 7.57649274 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 107 | 5.25e-25 | NR | HKX61339.1 | 2499141 | g117290 | i0 | 75.4 | 0.859030837004405 | 65 | 16 | 85.9 | 0 | 15 | 209 | 290 | 354 | HKX61339.1 1-acyl-sn-glycerol-3-phosphate acyltransferase [Verrucomicrobiia bacterium] | diamond | 195 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 27478354 | 27478354 | PRJNA1092581_P_NODE_101183_length_251_cov_2.573034_g100650_i0 | PRJNA1092581 | 101183 | 251 | 2.573034 | 6.45831534 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 159 | 3.2599999999999993e-43 | NR | MFN4874371.1 | 2562705 | g100650 | i0 | 94.9 | 0.932270916334661 | 78 | 4 | 93.2 | 0 | 235 | 2 | 319 | 396 | MFN4874371.1 DUF6288 domain-containing protein [Akkermansiaceae bacterium] | diamond | 234 | 159 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 27731302 | 27731302 | PRJNA1092581_P_NODE_92604_length_265_cov_1.588542_g92071_i0 | PRJNA1092581 | 92604 | 265 | 1.588542 | 4.2096363 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 49.7 | 1.78e-4 | NR | WP_294227263.1 | 1965333 | g92071 | i0 | 51.9 | 0.588679245283019 | 52 | 17 | 58.9 | 1 | 109 | 264 | 577 | 620 | WP_294227263.1 caspase family protein [Prosthecobacter sp.] | diamond | 156 | 49.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 27762796 | 27762796 | PRJNA1092581_P_NODE_111644_length_237_cov_4.573171_g111111_i0 | PRJNA1092581 | 111644 | 237 | 4.573171 | 10.83841527 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 87.8 | 4.61e-18 | NR | XHR26832.1 | 2811408 | g111111 | i0 | 54.2 | 0.911392405063291 | 72 | 33 | 91.1 | 0 | 226 | 11 | 216 | 287 | XHR26832.1 MAG: heparinase II/III family protein [Chthoniobacteraceae bacterium] | diamond | 216 | 87.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 28015248 | 28015248 | PRJNA1092581_P_NODE_124685_length_208_cov_4.111111_g124152_i0 | PRJNA1092581 | 124685 | 208 | 4.111111 | 8.55111088 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 122 | 2.8699999999999997e-30 | NR | MDQ3118317.1 | 2026799 | g124152 | i0 | 87.1 | 0.894230769230769 | 62 | 8 | 89.4 | 0 | 12 | 197 | 126 | 187 | MDQ3118317.1 molybdopterin-dependent oxidoreductase [Verrucomicrobiota bacterium] | diamond | 186 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28038219 | 28038219 | PRJNA1092581_P_NODE_107885_length_243_cov_1.164706_g107352_i0 | PRJNA1092581 | 107885 | 243 | 1.164706 | 2.83023558 | root | 1 | Root_unresolved | Root_unresolved | 115 | 4.5e-29 | NR | OYV03690.1 | 2015575 | g107352 | i0 | 67.5 | 8.90123456790123 | 80 | 26 | 98.8 | 0 | 240 | 1 | 64 | 143 | OYV03690.1 MAG: hypothetical protein CFE26_20825 [Verrucomicrobiales bacterium VVV1] | diamond | 2163 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium VVV1 | |||
| 28078177 | 28078177 | PRJNA1092581_P_NODE_101105_length_251_cov_3.067416_g100572_i0 | PRJNA1092581 | 101105 | 251 | 3.067416 | 7.69921416 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 90.9 | 4.88e-19 | NR | MBI3869869.1 | 2026799 | g100572 | i0 | 61 | 0.920318725099602 | 77 | 30 | 92 | 0 | 21 | 251 | 1910 | 1986 | MBI3869869.1 VCBS repeat-containing protein [Verrucomicrobiota bacterium] | diamond | 231 | 90.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28835993 | 28835993 | PRJNA1092581_P_NODE_33448_length_477_cov_4.059406_g32916_i0 | PRJNA1092581 | 33448 | 477 | 4.059406 | 19.36336662 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 166 | 3.1599999999999996e-47 | NR | MEC7609401.1 | 2026799 | g32916 | i0 | 56.8 | 0.918238993710692 | 146 | 62 | 91.8 | 1 | 445 | 8 | 90 | 234 | MEC7609401.1 ribonuclease H family protein [Verrucomicrobiota bacterium] | diamond | 438 | 166 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28930874 | 28930874 | PRJNA1092581_P_NODE_92588_length_265_cov_1.604167_g92055_i0 | PRJNA1092581 | 92588 | 265 | 1.604167 | 4.25104255 | Verrucomicrobia bacterium Tous-C9LFEB | 1982333 | Bacteria | Bacteria | 140 | 1.45e-39 | NR | PAW78676.1 | 1982333 | g92055 | i0 | 92.7 | 0.928301886792453 | 82 | 6 | 92.8 | 0 | 253 | 8 | 128 | 209 | PAW78676.1 MAG: deoxyribose-phosphate aldolase [Verrucomicrobia bacterium Tous-C9LFEB] | diamond | 246 | 140 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium Tous-C9LFEB | |||||
| 28962572 | 28962572 | PRJNA1092581_P_NODE_10228_length_846_cov_5.944373_g9793_i0 | PRJNA1092581 | 10228 | 846 | 5.944373 | 50.28939558 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 239 | 9.15e-76 | NR | MBI2927909.1 | 2026799 | g9793 | i0 | 84.5 | 0.549645390070922 | 155 | 23 | 54.6 | 1 | 8 | 469 | 38 | 192 | MBI2927909.1 DUF2589 domain-containing protein [Verrucomicrobiota bacterium] | diamond | 465 | 239 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29088751 | 29088751 | PRJNA1092581_P_NODE_74248_length_302_cov_4.685590_g73715_i0 | PRJNA1092581 | 74248 | 302 | 4.68559 | 14.1504818 | Prosthecobacter debontii | 48467 | Bacteria | Bacteria | 186 | 1.78e-56 | NR | WP_078812677.1 | 48467 | g73715 | i0 | 91.6 | 3.77483443708609 | 95 | 8 | 94.4 | 0 | 286 | 2 | 146 | 240 | WP_078812677.1 ROK family protein [Prosthecobacter debontii] | diamond | 1140 | 186 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter debontii | |
| 29174952 | 29174952 | PRJNA1092581_P_NODE_59889_length_342_cov_10.434944_g59356_i0 | PRJNA1092581 | 59889 | 342 | 10.434944 | 35.68750848 | Opitutus | 178440 | Bacteria | Bacteria | 141 | 1.17e-36 | NR | MCS6244044.1 | 1913982 | g59356 | i0 | 85.2 | 2.20175438596491 | 81 | 12 | 71.1 | 0 | 80 | 322 | 5 | 85 | MCS6244044.1 hypothetical protein [Opitutus sp.] | diamond | 753 | 142 | 0.992957746478873 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. | |
| 29530720 | 29530720 | PRJNA1092581_P_NODE_102970_length_249_cov_1.397727_g102437_i0 | PRJNA1092581 | 102970 | 249 | 1.397727 | 3.48034023 | Chthoniobacter sp. | 2510640 | Bacteria | Bacteria | 77.8 | 2.46e-15 | NR | MDB6150894.1 | 2510640 | g102437 | i0 | 48.6 | 0.891566265060241 | 74 | 37 | 89.2 | 1 | 23 | 244 | 9 | 81 | MDB6150894.1 hypothetical protein [Chthoniobacter sp.] | diamond | 222 | 77.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter sp. | |
| 29624935 | 29624935 | PRJNA1092581_P_NODE_71230_length_310_cov_1.341772_g70697_i0 | PRJNA1092581 | 71230 | 310 | 1.341772 | 4.1594932 | Luteolibacter sp. SL25 | 1962973 | Bacteria | Bacteria | 155 | 2.68e-41 | NR | WP_267670376.1 | 2995170 | g70697 | i0 | 83.1 | 0.861290322580645 | 89 | 15 | 86.1 | 0 | 21 | 287 | 613 | 701 | WP_267670376.1 ATP-dependent helicase HrpB [Luteolibacter sp. SL250] | diamond | 267 | 155 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 30099021 | 30099021 | PRJNA1092581_P_NODE_69832_length_313_cov_5.162500_g69299_i0 | PRJNA1092581 | 69832 | 313 | 5.1625 | 16.158625 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 60.5 | 1.51e-8 | NR | MDC0319417.1 | 2026799 | g69299 | i0 | 54 | 1.87859424920128 | 63 | 29 | 60.4 | 0 | 297 | 109 | 24 | 86 | MDC0319417.1 ankyrin repeat domain-containing protein [Verrucomicrobiota bacterium] | diamond | 588 | 60.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30383938 | 30383938 | PRJNA1092581_P_NODE_39033_length_438_cov_6.323288_g38500_i0 | PRJNA1092581 | 39033 | 438 | 6.323288 | 27.69600144 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 73.6 | 4.88e-13 | NR | MBI2927908.1 | 2026799 | g38500 | i0 | 57.7 | 0.534246575342466 | 78 | 31 | 53.4 | 1 | 1 | 234 | 107 | 182 | MBI2927908.1 DUF2589 domain-containing protein [Verrucomicrobiota bacterium] | diamond | 234 | 73.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30446910 | 30446910 | PRJNA1092581_P_NODE_33193_length_479_cov_5.687192_g32661_i0 | PRJNA1092581 | 33193 | 479 | 5.687192 | 27.24164968 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 70.1 | 8.91e-11 | NR | HST77250.1 | 2499141 | g32661 | i0 | 56.5 | 0.388308977035491 | 62 | 25 | 38.2 | 2 | 187 | 5 | 1 | 61 | HST77250.1 DUF932 domain-containing protein [Verrucomicrobiia bacterium] | diamond | 186 | 70.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 30857407 | 30857407 | PRJNA1092581_P_NODE_91294_length_267_cov_3.175258_g90761_i0 | PRJNA1092581 | 91294 | 267 | 3.175258 | 8.47793886 | Opitutia bacterium AMD-G1 | 1982316 | Bacteria | Bacteria | 170 | 5.219999999999998e-47 | NR | PAZ03914.1 | 1982316 | g90761 | i0 | 96.4 | 1.86516853932584 | 83 | 3 | 93.3 | 0 | 259 | 11 | 259 | 341 | PAZ03914.1 MAG: hypothetical protein CAK86_06585 [Opitutia bacterium AMD-G1] | diamond | 498 | 170 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium AMD-G1 | ||||
| 31489917 | 31489917 | PRJNA1092581_P_NODE_48296_length_388_cov_2.828571_g47763_i0 | PRJNA1092581 | 48296 | 388 | 2.828571 | 10.97485548 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 113 | 2.9100000000000004e-26 | NR | MES2660535.1 | 2026799 | g47763 | i0 | 73 | 1.77835051546392 | 115 | 31 | 88.9 | 0 | 366 | 22 | 459 | 573 | MES2660535.1 right-handed parallel beta-helix repeat-containing protein [Verrucomicrobiota bacterium] | diamond | 690 | 113 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32217357 | 32217357 | PRJNA1092581_P_NODE_76478_length_297_cov_2.397321_g75945_i0 | PRJNA1092581 | 76478 | 297 | 2.397321 | 7.12004337 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 185 | 5.02e-53 | NR | HEY1081139.1 | 1965333 | g75945 | i0 | 96.8 | 3.75757575757576 | 93 | 3 | 93.9 | 0 | 279 | 1 | 81 | 173 | HEY1081139.1 response regulator [Prosthecobacter sp.] | diamond | 1116 | 185 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 32375612 | 32375612 | PRJNA1092581_P_NODE_37699_length_447_cov_3.122995_g37167_i0 | PRJNA1092581 | 37699 | 447 | 3.122995 | 13.95978765 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 178 | 2.33e-52 | NR | MFM7183049.1 | 2026801 | g37167 | i0 | 60.8 | 0.959731543624161 | 143 | 55 | 96 | 1 | 18 | 446 | 15 | 156 | MFM7183049.1 methyltransferase domain-containing protein [Verrucomicrobiales bacterium] | diamond | 429 | 178 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;