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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA1092581" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA1092581 · 23 ✖

analysis 1

  • diamond · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6574097 6574097 PRJNA1092581_P_NODE_17286_length_668_cov_3.132773_g16776_i0 PRJNA1092581 17286 668 3.132773 20.92692364 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 372 7.92e-117   NR KAI9992435.1 4787 g16776 i0 86.9 16.6302395209581 222 12 99.7 2 667 2 709 913 KAI9992435.1 hypothetical protein PInf_017844 [Phytophthora infestans] diamond 11109 372 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
26877988 26877988 PRJNA1092581_P_NODE_24401_length_563_cov_3.995918_g23875_i0 PRJNA1092581 24401 563 3.995918 22.49701834 Phytophthora cactorum 29920 SAR_Eukaryotes SAR_Eukaryotes 52.8 2.63e-4   NR KAG3065807.1 29920 g23875 i0 92 0.532859680284192 25 2 13.3 0 467 393 488 512 KAG3065807.1 hypothetical protein PC121_g11159 [Phytophthora cactorum] diamond 300 52.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
27257227 27257227 PRJNA1092581_P_NODE_79563_length_290_cov_3.046083_g79030_i0 PRJNA1092581 79563 290 3.046083 8.8336407 Phytophthora megakarya 4795 SAR_Eukaryotes SAR_Eukaryotes 78.2 2.08e-14   NR OWZ22933.1 4795 g79030 i0 66.1 1.15862068965517 56 19 57.9 0 218 51 370 425 OWZ22933.1 hypothetical protein PHMEG_0002284 [Phytophthora megakarya] diamond 336 78.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
27762812 27762812 PRJNA1092581_P_NODE_20624_length_612_cov_4.155844_g20103_i0 PRJNA1092581 20624 612 4.155844 25.43376528 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 386 6.189999999999998e-132   NR KAF4135675.1 4787 g20103 i0 98.4 0.941176470588235 192 3 94.1 0 578 3 1 192 KAF4135675.1 hypothetical protein GN958_ATG15137 [Phytophthora infestans] diamond 576 386 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
28299240 28299240 PRJNA1092581_P_NODE_83886_length_281_cov_2.625000_g83353_i0 PRJNA1092581 83886 281 2.625 7.37625 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 65.9 2.22e-10   NR CCI41133.1 65357 g83353 i0 41.7 1.62277580071174 84 44 89.7 1 27 278 96 174 CCI41133.1 unnamed protein product [Albugo candida] diamond 456 65.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
28353803 28353803 PRJNA1092581_P_NODE_79066_length_291_cov_3.697248_g78533_i0 PRJNA1092581 79066 291 3.697248 10.75899168 root 1 Root_unresolved Root_unresolved 64.3 1.71e-9   NR GMF23042.1 1490495 g78533 i0 40.7 2.31958762886598 91 52 91.8 1 6 272 294 384 GMF23042.1 unnamed protein product [Phytophthora fragariaefolia] diamond 675 64.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariaefolia
28709923 28709923 PRJNA1092581_P_NODE_110647_length_239_cov_3.036145_g110114_i0 PRJNA1092581 110647 239 3.036145 7.25638655 Phytophthora idaei 53986 SAR_Eukaryotes SAR_Eukaryotes 80.9 1.08e-16   NR KAG3234205.1 53986 g110114 i0 67.8 1.48117154811715 59 19 74.1 0 63 239 1 59 KAG3234205.1 hypothetical protein PI124_g20737 [Phytophthora idaei] diamond 354 80.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora idaei
29277916 29277916 PRJNA1092581_P_NODE_18889_length_640_cov_3.104056_g18372_i0 PRJNA1092581 18889 640 3.104056 19.8659584 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 248 2.49e-81   NR KAF4039341.1 4787 g18372 i0 100 0.6046875 129 0 60.5 0 437 51 1 129 KAF4039341.1 hypothetical protein GN244_ATG08474 [Phytophthora infestans] diamond 387 248 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
30257471 30257471 PRJNA1092581_P_NODE_127112_length_200_cov_5.590551_g126579_i0 PRJNA1092581 127112 200 5.590551 11.181102 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 65.5 1.94e-10   NR KAI9979422.1 4787 g126579 i0 53.5 1.065 71 8 69 1 186 49 320 390 KAI9979422.1 hypothetical protein PInf_029840 [Phytophthora infestans] diamond 213 65.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
30509908 30509908 PRJNA1092581_P_NODE_84153_length_280_cov_6.574879_g83620_i0 PRJNA1092581 84153 280 6.574879 18.4096612 Peronospora effusa 542832 SAR_Eukaryotes SAR_Eukaryotes 107 1.03e-24   NR RMX63336.1 542832 g83620 i0 81.3 1.43571428571429 64 12 68.6 0 260 69 629 692 RMX63336.1 hypothetical protein DD238_007419 [Peronospora effusa] diamond 402 107 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora effusa
30564171 30564171 PRJNA1092581_P_NODE_41793_length_422_cov_1.916905_g41260_i0 PRJNA1092581 41793 422 1.916905 8.0893391 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 74.7 6.27e-14   NR KAF0734040.1 100861 g41260 i0 43 4.23696682464455 100 50 71.1 2 342 43 43 135 KAF0734040.1 hypothetical protein Ae201684_009213 [Aphanomyces euteiches] diamond 1788 74.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
30794175 30794175 PRJNA1092581_P_NODE_37094_length_451_cov_3.595238_g36562_i0 PRJNA1092581 37094 451 3.595238 16.21452338 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 74.3 2.82e-12   NR XP_009825362.1 112090 g36562 i0 56.5 0.824833702882483 62 25 40.6 2 390 208 359 419 XP_009825362.1 hypothetical protein H257_03107 [Aphanomyces astaci] diamond 372 74.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
30857409 30857409 PRJNA1092581_P_NODE_97094_length_257_cov_4.695652_g96561_i0 PRJNA1092581 97094 257 4.695652 12.06782564 Phytophthora capsici 4784 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0233   NR KAG1689214.1 4784 g96561 i0 71.4 0.326848249027237 28 8 32.7 0 118 35 30 57 KAG1689214.1 hypothetical protein DVH05_002707 [Phytophthora capsici] diamond 84 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
31070205 31070205 PRJNA1092581_P_NODE_58675_length_347_cov_1.802920_g58142_i0 PRJNA1092581 58675 347 1.80292 6.2561324 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 175 7.55e-51   NR KAE8894770.1 53985 g58142 i0 82.4 19.7377521613833 108 17 91.6 1 1 318 183 290 KAE8894770.1 hypothetical protein PF003_g21372 [Phytophthora fragariae] diamond 6849 175 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
31173065 31173065 PRJNA1092581_P_NODE_14875_length_716_cov_4.734059_g14383_i0 PRJNA1092581 14875 716 4.734059 33.89586244 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 107 1.17e-25   NR KAF4140891.1 4787 g14383 i0 100 0.213687150837989 51 0 21.4 0 155 3 1 51 KAF4140891.1 hypothetical protein GN958_ATG09739 [Phytophthora infestans] diamond 153 107 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
31426390 31426390 PRJNA1092581_P_NODE_94436_length_261_cov_102.973404_g93903_i0 PRJNA1092581 94436 261 102.973404 268.76058444 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00204   NR KAJ8576161.1 4785 g93903 i0 43.2 0.931034482758621 81 42 89.7 2 246 13 60 139 KAJ8576161.1 hypothetical protein ON010_g3053 [Phytophthora cinnamomi] diamond 243 46.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
31639080 31639080 PRJNA1092581_P_NODE_87796_length_273_cov_5.155000_g87263_i0 PRJNA1092581 87796 273 5.155 14.07315 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.1 6.9e-7   NR XP_024584955.1 4781 g87263 i0 49.2 1.3956043956044 59 30 64.8 0 257 81 106 164 XP_024584955.1 60s ribosomal protein [Plasmopara halstedii] diamond 381 55.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
31679309 31679309 PRJNA1092581_P_NODE_14017_length_736_cov_4.591252_g13528_i0 PRJNA1092581 14017 736 4.591252 33.79161472 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 56.6 4.26e-5   NR DAZ94965.1 4803 g13528 i0 39.5 0.309782608695652 76 39 31 3 23 250 1183 1251 DAZ94965.1 TPA: hypothetical protein N0F65_000060, partial [Lagenidium giganteum] diamond 228 56.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
31837425 31837425 PRJNA1092581_P_NODE_82837_length_283_cov_3.290476_g82304_i0 PRJNA1092581 82837 283 3.290476 9.31204708 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 99.4 7.77e-22   NR KUF76843.1 4792 g82304 i0 87.3 2.91519434628975 55 7 58.3 0 43 207 688 742 KUF76843.1 Spore wall maturation protein DIT1 [Phytophthora nicotianae] diamond 825 99.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
31995837 31995837 PRJNA1092581_P_NODE_40518_length_429_cov_5.772472_g39985_i0 PRJNA1092581 40518 429 5.772472 24.76390488 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 214 1.12e-68   NR KAF4046866.1 4787 g39985 i0 98.2 0.783216783216783 112 2 78.3 0 378 43 9 120 KAF4046866.1 hypothetical protein GN244_ATG00694 [Phytophthora infestans] diamond 336 214 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
32090739 32090739 PRJNA1092581_P_NODE_107298_length_243_cov_6.488235_g106765_i0 PRJNA1092581 107298 243 6.488235 15.76641105 Phytophthora capsici 4784 SAR_Eukaryotes SAR_Eukaryotes 58.9 7.37e-8   NR KAG1708694.1 4784 g106765 i0 100 0.358024691358025 29 0 35.8 0 224 138 1197 1225 KAG1708694.1 hypothetical protein DVH05_022320 [Phytophthora capsici] diamond 87 58.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
32312509 32312509 PRJNA1092581_P_NODE_90319_length_269_cov_1.887755_g89786_i0 PRJNA1092581 90319 269 1.887755 5.07806095 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 120 1.82e-31   NR KAI9981165.1 4787 g89786 i0 79.7 0.8810408921933092 79 16 88.1 0 6 242 157 235 KAI9981165.1 hypothetical protein PInf_010795 [Phytophthora infestans] diamond 237 120 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
32650924 32650924 PRJNA1092581_P_NODE_60140_length_342_cov_1.776952_g59607_i0 PRJNA1092581 60140 342 1.776952 6.07717584 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 135 1.73e-37   NR KAJ8509205.1 4785 g59607 i0 78.1 23.0438596491228 73 16 64 0 294 76 48 120 KAJ8509205.1 hypothetical protein ON010_g18793 [Phytophthora cinnamomi] diamond 7881 136 0.992647058823529 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;