RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1092581" and tax_phylum = "Lenarviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1092581 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28615103 28615103 PRJNA1092581_P_NODE_117227_length_228_cov_3.406452_g116694_i0 PRJNA1092581 117227 228 3.406452 7.76671056 Grapevine wood holobiome associated narna-like virus 2 3398656 Viruses Viruses 65.9 2.17e-10   NR XOD45334.1 3398656 g116694 i0 48.5 3.96052631578947 66 33 86.8 1 18 215 123 187 XOD45334.1 RdRp [Grapevine wood holobiome associated narna-like virus 2] diamond 903 65.9 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 2
30257489 30257489 PRJNA1092581_P_NODE_71372_length_309_cov_5.576271_g70839_i0 PRJNA1092581 71372 309 5.576271 17.23067739 Botourmiaviridae sp. 2808997 Viruses Viruses 99.4 1.07e-21   NR UJQ91993.1 2808997 g70839 i0 52.7 0.902912621359223 93 44 90.3 0 283 5 587 679 UJQ91993.1 MAG: putative RNA-dependent RNA polymerase, partial [Botourmiaviridae sp.] diamond 279 99.4 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;