RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1092581" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1092581 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26774252 26774252 PRJNA1092581_P_NODE_61701_length_337_cov_3.090909_g61168_i0 PRJNA1092581 61701 337 3.090909 10.41636333 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 61.6 2.69e-8   NR CAK8761882.1 28002 g61168 i0 50 3.61424332344214 58 29 51.6 0 330 157 783 840 CAK8761882.1 HINF_004284 [Hexamita inflata] diamond 1218 61.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
27447045 27447045 PRJNA1092581_P_NODE_121883_length_216_cov_6.475524_g121350_i0 PRJNA1092581 121883 216 6.475524 13.98713184 Giardia lamblia P15 658858 Fornicata other_Eukaryota 42 0.0495   NR EFO65611.1 658858 g121350 i0 38.7 0.861111111111111 62 35 86.1 1 193 8 229 287 EFO65611.1 Hypothetical protein GLP15_1712 [Giardia lamblia P15] diamond 186 42 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;