RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1092581" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1092581 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23149591 23149591 PRJNA1092581_P_NODE_60099_length_342_cov_2.379182_g59566_i0 PRJNA1092581 60099 342 2.379182 8.13680244 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 163 1.85e-48   NR CEL76814.1 432359 g59566 i0 74.8 4.57017543859649 103 26 90.4 0 33 341 65 167 CEL76814.1 TPA: 40S ribosomal protein S15a, putative [Toxoplasma gondii VEG] diamond 1563 163 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
32470618 32470618 PRJNA1092581_P_NODE_22959_length_581_cov_3.137795_g22436_i0 PRJNA1092581 22959 581 3.137795 18.23058895 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 47.4 0.0172   NR XP_013247008.1 5801 g22436 i0 53.1 0.253012048192771 49 11 19.1 1 579 469 393 441 XP_013247008.1 mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase, putative [Eimeria acervulina] diamond 147 47.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;