RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1092581" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1092581 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9124302 9124302 PRJNA1092581_P_NODE_34128_length_472_cov_2.601504_g33596_i0 PRJNA1092581 34128 472 2.601504 12.27909888 Metazoa 33208 Annelida Annelida 185 9.83e-57   NR ABW90355.1 6446 g33596 i0 65.5 13.2902542372881 142 49 90.3 0 459 34 27 168 ABW90355.1 putative ribosomal protein L23a [Sipunculus nudus] diamond 6273 186 0.99462365591397806 Eukaryota Opisthokonta Metazoa Annelida Sipuncula Golfingiida Sipunculidae Sipunculus Sipunculus nudus
19323690 19323690 PRJNA1092581_P_NODE_84356_length_280_cov_2.975845_g83823_i0 PRJNA1092581 84356 280 2.975845 8.332366 Polychaeta 6341 Annelida Annelida 78.6 4.17e-15   NR CAH1777065.1 6347 g83823 i0 68.6 1.08214285714286 51 16 54.6 0 119 271 70 120 CAH1777065.1 unnamed protein product [Owenia fusiformis] diamond 303 78.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
26655825 26655825 PRJNA1092581_P_NODE_64941_length_327_cov_2.448819_g64408_i0 PRJNA1092581 64941 327 2.448819 8.00763813 Helobdella robusta 6412 Annelida Annelida 58.9 2.11e-7   NR XP_009027794.1 6412 g64408 i0 41 5.91743119266055 83 49 76.1 0 325 77 156 238 XP_009027794.1 hypothetical protein HELRODRAFT_187454 [Helobdella robusta] diamond 1935 58.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;