RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA1092581" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 8 ✖

bioproject 1

  • PRJNA1092581 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27825776 27825776 PRJNA1092581_P_NODE_115544_length_231_cov_2.012658_g115011_i0 PRJNA1092581 115544 231 2.012658 4.64923998 Totiviridae sp. 1955172 Viruses Viruses 87.8 4.26e-18   NR WAK77569.1 1955172 g115011 i0 53.9 0.987012987012987 76 35 98.7 0 3 230 399 474 WAK77569.1 MAG: capsid protein [Totiviridae sp.] diamond 228 87.8 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
28615103 28615103 PRJNA1092581_P_NODE_117227_length_228_cov_3.406452_g116694_i0 PRJNA1092581 117227 228 3.406452 7.76671056 Grapevine wood holobiome associated narna-like virus 2 3398656 Viruses Viruses 65.9 2.17e-10   NR XOD45334.1 3398656 g116694 i0 48.5 3.96052631578947 66 33 86.8 1 18 215 123 187 XOD45334.1 RdRp [Grapevine wood holobiome associated narna-like virus 2] diamond 903 65.9 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 2
28994227 28994227 PRJNA1092581_P_NODE_75188_length_300_cov_3.312775_g74655_i0 PRJNA1092581 75188 300 3.312775 9.938325 Malassezia globosa associated totivirus 1 3048756 Viruses Viruses 151 3.2399999999999992e-40   NR CAI9858974.1 3048756 g74655 i0 72.4 0.98 98 27 98 0 294 1 349 446 CAI9858974.1 capsid protein [Malassezia globosa associated totivirus 1] diamond 294 151 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia globosa associated totivirus 1
29057203 29057203 PRJNA1092581_P_NODE_88228_length_272_cov_13.608040_g87695_i0 PRJNA1092581 88228 272 13.60804 37.0138688 Totiviridae sp. 1955172 Viruses Viruses 82.4 5.85e-16   NR WAK77569.1 1955172 g87695 i0 48.1 0.849264705882353 77 40 84.9 0 251 21 269 345 WAK77569.1 MAG: capsid protein [Totiviridae sp.] diamond 231 82.4 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
29522018 29522018 PRJNA1092581_P_NODE_71370_length_309_cov_5.601695_g70837_i0 PRJNA1092581 71370 309 5.601695 17.30923755 Chuvivirus 2842604 Viruses Viruses 125 2.72e-31   NR WET19887.1 2842604 g70837 i0 60 3.70873786407767 95 38 92.2 0 24 308 308 402 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 1146 125 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus
30257489 30257489 PRJNA1092581_P_NODE_71372_length_309_cov_5.576271_g70839_i0 PRJNA1092581 71372 309 5.576271 17.23067739 Botourmiaviridae sp. 2808997 Viruses Viruses 99.4 1.07e-21   NR UJQ91993.1 2808997 g70839 i0 52.7 0.902912621359223 93 44 90.3 0 283 5 587 679 UJQ91993.1 MAG: putative RNA-dependent RNA polymerase, partial [Botourmiaviridae sp.] diamond 279 99.4 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
30889088 30889088 PRJNA1092581_P_NODE_15194_length_709_cov_3.525157_g14701_i0 PRJNA1092581 15194 709 3.525157 24.99336313 Totiviridae sp. 1955172 Viruses Viruses 295 4.88e-92   NR WAK77569.1 1955172 g14701 i0 58.2 1.00282087447109 237 98 99.9 1 709 2 164 400 WAK77569.1 MAG: capsid protein [Totiviridae sp.] diamond 711 295 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
31869148 31869148 PRJNA1092581_P_NODE_37657_length_447_cov_4.395722_g37125_i0 PRJNA1092581 37657 447 4.395722 19.64887734 African cichlid piscichuvirus 3065075 Viruses Viruses 99.8 4.78e-21   NR WLN26256.1 3065075 g37125 i0 49 0.671140939597315 100 51 67.1 0 444 145 135 234 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 300 99.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;