RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1089179" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA1089179 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16320062 16320062 PRJNA1089179_P_NODE_12193_length_270_cov_1.969543_g12175_i0 PRJNA1089179 12193 270 1.969543 5.3177661 African cichlid piscichuvirus 3065075 Viruses Viruses 85.1 6.59e-17   NR WLN26256.1 3065075 g12175 i0 51.3 0.888888888888889 80 39 88.9 0 2 241 236 315 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 240 85.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
27532888 27532888 PRJNA1089179_P_NODE_7843_length_321_cov_3.802419_g7825_i0 PRJNA1089179 7843 321 3.802419 12.20576499 Chuvivirus 2842604 Viruses Viruses 139 2.12e-36   NR WET19887.1 2842604 g7825 i0 64.2 1.98130841121495 106 38 99.1 0 2 319 249 354 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 636 139 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus
31679285 31679285 PRJNA1089179_P_NODE_3297_length_446_cov_4.080429_g3279_i0 PRJNA1089179 3297 446 4.080429 18.19871334 African cichlid piscichuvirus 3065075 Viruses Viruses 100 1.82e-21   NR UVF58767.1 3065075 g3279 i0 39.9 1.02914798206278 153 87 99.6 2 2 445 2 154 UVF58767.1 MAG: L protein [Salarius guttatus piscichuvirus] diamond 459 100 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;