RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1089179" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA1089179 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26909394 26909394 PRJNA1089179_P_NODE_9742_length_295_cov_1.734234_g9724_i0 PRJNA1089179 9742 295 1.734234 5.1159903 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 62 7.31e-9   NR KAG8458479.1 2081491 g9724 i0 43.6 0.793220338983051 78 44 79.3 0 295 62 48 125 KAG8458479.1 hypothetical protein KFE25_004357 [Diacronema lutheri] diamond 234 62 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
30509850 30509850 PRJNA1089179_P_NODE_1453_length_592_cov_151.897881_g1436_i0 PRJNA1089179 1453 592 151.897881 899.23545552 Emiliania huxleyi CCMP1516 280463 Haptophyta other_Eukaryota 109 1.04e-26   NR XP_005778651.1 280463 g1436 i0 39.9 0.724662162162162 143 74 72.5 2 81 509 2 132 XP_005778651.1 hypothetical protein EMIHUDRAFT_73627, partial [Emiliania huxleyi CCMP1516] diamond 429 109 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;