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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1089179" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA1089179 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26655780 26655780 PRJNA1089179_P_NODE_16441_length_244_cov_0.900585_g16423_i0 PRJNA1089179 16441 244 0.900585 2.1974274 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 99.8 3.45e-22   NR HRF28156.1 2026720 g16423 i0 64.9 0.94672131147541 77 27 94.7 0 10 240 421 497 HRF28156.1 carbohydrate binding domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 231 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28930811 28930811 PRJNA1089179_P_NODE_7068_length_335_cov_0.973282_g7050_i0 PRJNA1089179 7068 335 0.973282 3.2604947 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 87 1.01e-17   NR MEZ7892831.1 2053640 g7050 i0 73.3 0.537313432835821 60 16 53.7 0 156 335 2 61 MEZ7892831.1 GDP-mannose 4,6-dehydratase [Candidatus Wallbacteria bacterium] diamond 180 87 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
29435625 29435625 PRJNA1089179_P_NODE_16610_length_243_cov_0.905882_g16592_i0 PRJNA1089179 16610 243 0.905882 2.20129326 Patescibacteria group bacterium 2052139 Bacteria Bacteria 107 8.88e-26   NR HEX3096039.1 2052139 g16592 i0 65 1.97530864197531 80 28 98.8 0 2 241 73 152 HEX3096039.1 nucleotidyltransferase domain-containing protein [Patescibacteria group bacterium] diamond 480 107 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29719827 29719827 PRJNA1089179_P_NODE_17330_length_241_cov_0.916667_g17312_i0 PRJNA1089179 17330 241 0.916667 2.20916747 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 123 4.869999999999999e-31   NR MFO0881946.1 2973664 g17312 i0 72.2 9.99585062240664 79 21 98.3 1 240 4 22 99 MFO0881946.1 phytoene desaturase family protein [Candidatus Saccharimonadales bacterium] diamond 2409 123 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
29972730 29972730 PRJNA1089179_P_NODE_5611_length_365_cov_1.876712_g5593_i0 PRJNA1089179 5611 365 1.876712 6.8499988 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 44.3 0.039   NR MBC7982124.1 2762014 g5593 i0 95 0.164383561643836 20 1 16.4 0 61 2 1 20 MBC7982124.1 IS1182 family transposase [Candidatus Parcubacteria bacterium] diamond 60 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32722781 32722781 PRJNA1089179_P_NODE_15560_length_247_cov_0.885057_g15542_i0 PRJNA1089179 15560 247 0.885057 2.18609079 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 108 5.99e-26   NR HMR55565.1 2052150 g15542 i0 61.7 0.983805668016194 81 31 98.4 0 245 3 50 130 HMR55565.1 ABC transporter ATP-binding protein [Candidatus Doudnabacteria bacterium] diamond 243 108 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;