RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1087264" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1087264 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31828749 31828749 PRJNA1087264_P_NODE_18697_length_164_cov_0.886957_g18615_i0 PRJNA1087264 18697 164 0.886957 1.45460948 root 1 Root_unresolved Root_unresolved 46.2 7.62e-4   NR MCK5559401.1 1906666 g18615 i0 55 4.40853658536585 40 18 73.2 0 124 5 4 43 MCK5559401.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Thermoplasmata archaeon] diamond 723 46.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32177180 32177180 PRJNA1087264_P_NODE_15418_length_166_cov_0.871795_g15336_i0 PRJNA1087264 15418 166 0.871795 1.4471797 Archaea 2157 Archaea Archaea 58.9 1.59e-8   NR KYK20436.1 1803817 g15336 i0 52.2 3.32530120481928 46 22 83.1 0 139 2 5 50 KYK20436.1 MAG: hypothetical protein AYK21_01300 [Thermoplasmatales archaeon SG8-52-2] diamond 552 58.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon SG8-52-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;