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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA1087264" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 13 ✖

bioproject 1

  • PRJNA1087264 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18045739 18045739 PRJNA1087264_P_NODE_16155_length_166_cov_0.871795_g16073_i0 PRJNA1087264 16155 166 0.871795 1.4471797 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 91.3 1.01e-19   NR MDZ4806006.1 2212470 g16073 i0 79.2 1.95180722891566 53 11 95.8 0 160 2 63 115 MDZ4806006.1 carboxyl transferase domain-containing protein [Candidatus Eiseniibacteriota bacterium] diamond 324 91.3 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
26624291 26624291 PRJNA1087264_P_NODE_19941_length_162_cov_1.805310_g19859_i0 PRJNA1087264 19941 162 1.80531 2.9246022 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 54.3 1.04e-6   NR HYH74432.1 2973664 g19859 i0 68.4 5.61111111111111 38 12 70.4 0 1 114 47 84 HYH74432.1 molecular chaperone DnaJ [Candidatus Saccharimonadales bacterium] diamond 909 54.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27099085 27099085 PRJNA1087264_P_NODE_6322_length_253_cov_1.357843_g6240_i0 PRJNA1087264 6322 253 1.357843 3.43534279 Minisyncoccota bacterium 2053589 Bacteria Bacteria 46.6 0.00178   NR HPP64811.1 2053589 g6240 i0 57.6 0.782608695652174 33 14 39.1 0 239 141 423 455 HPP64811.1 PKD domain-containing protein [Candidatus Paceibacterota bacterium] diamond 198 46.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27225370 27225370 PRJNA1087264_P_NODE_8323_length_219_cov_0.900000_g8241_i0 PRJNA1087264 8323 219 0.9 1.971 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 51.6 1.12e-5   NR MFS8160316.1 2282149 g8241 i0 38.6 0.958904109589041 70 35 95.9 2 8 217 134 195 MFS8160316.1 WD40 repeat domain-containing protein [Candidatus Roizmanbacteria bacterium] diamond 210 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
27478319 27478319 PRJNA1087264_P_NODE_5483_length_273_cov_1.361607_g5401_i0 PRJNA1087264 5483 273 1.361607 3.71718711 Patescibacteria group bacterium 2052139 Bacteria Bacteria 146 4.96e-39   NR MCL4419431.1 2052139 g5401 i0 79.1 1 91 18 98.9 1 271 2 492 582 MCL4419431.1 hypothetical protein [Patescibacteria group bacterium] diamond 273 146 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28046617 28046617 PRJNA1087264_P_NODE_5365_length_276_cov_2.471366_g5283_i0 PRJNA1087264 5365 276 2.471366 6.82097016 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 53.5 7.65e-6   NR MDR3551468.1 2803731 g5283 i0 34.8 1 92 54 100 3 1 276 64 149 MDR3551468.1 hypothetical protein [Candidatus Babeliales bacterium] diamond 276 53.5 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
29025766 29025766 PRJNA1087264_P_NODE_17928_length_164_cov_0.886957_g17846_i0 PRJNA1087264 17928 164 0.886957 1.45460948 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42.7 0.0128   NR HLC43987.1 2052139 g17846 i0 27.8 1.9390243902439 54 39 98.8 0 3 164 135 188 HLC43987.1 UDP-glucose 4-epimerase [Patescibacteria group bacterium] diamond 318 42.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30920793 30920793 PRJNA1087264_P_NODE_8814_length_212_cov_1.251534_g8732_i0 PRJNA1087264 8814 212 1.251534 2.65325208 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 42.4 0.0341   NR MDR3549977.1 2803731 g8732 i0 35.9 0.905660377358491 64 39 89.2 2 189 1 261 323 MDR3549977.1 ankyrin repeat domain-containing protein [Candidatus Babeliales bacterium] diamond 192 42.4 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
31015376 31015376 PRJNA1087264_P_NODE_15095_length_167_cov_0.864407_g15013_i0 PRJNA1087264 15095 167 0.864407 1.44355969 Candidatus Jorgensenbacteria bacterium 2268185 Bacteria Bacteria 42.7 0.0135   NR HDY73098.1 2268185 g15013 i0 41.5 0.736526946107784 41 24 73.7 0 26 148 300 340 HDY73098.1 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [Candidatus Jorgensenbacteria bacterium] diamond 123 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Joergenseniibacteriota         Candidatus Jorgensenbacteria bacterium
31742540 31742540 PRJNA1087264_P_NODE_2177_length_456_cov_2.002457_g2096_i0 PRJNA1087264 2177 456 2.002457 9.13120392 Candidatus Colwellbacteria bacterium 2750074 Bacteria Bacteria 156 1.4099999999999998e-45   NR MDD4931421.1 2750074 g2096 i0 81.1 0.625 95 18 62.5 0 170 454 41 135 MDD4931421.1 hypothetical protein [Candidatus Colwellbacteria bacterium] diamond 285 156 1 Bacteria Bacteria candidate phyla   Candidatus Colwelliibacteriota         Candidatus Colwellbacteria bacterium
31774186 31774186 PRJNA1087264_P_NODE_1397_length_566_cov_1.644101_g1321_i0 PRJNA1087264 1397 566 1.644101 9.30561166 Patescibacteria group bacterium 2052139 Bacteria Bacteria 48.9 0.00515   NR MBU1017806.1 2052139 g1321 i0 31 0.46113074204947 87 53 43.5 2 147 392 578 662 MBU1017806.1 hypothetical protein [Patescibacteria group bacterium] diamond 261 48.9 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32280743 32280743 PRJNA1087264_P_NODE_5839_length_264_cov_1.897674_g5757_i0 PRJNA1087264 5839 264 1.897674 5.00985936 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 78.6 1.69e-15   NR MET0151620.1 2838779 g5757 i0 44.3 2.01136363636364 88 47 97.7 2 4 261 97 184 MET0151620.1 glutathione S-transferase [Candidatus Binatia bacterium] diamond 531 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32848616 32848616 PRJNA1087264_P_NODE_11140_length_189_cov_1.414286_g11058_i0 PRJNA1087264 11140 189 1.414286 2.67300054 Patescibacteria group bacterium 2052139 Bacteria Bacteria 107 1.22e-25   NR MCL4419852.1 2052139 g11058 i0 88.5 2.92063492063492 61 7 96.8 0 184 2 307 367 MCL4419852.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Patescibacteria group bacterium] diamond 552 107 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;