RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1086823" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1086823 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29498985 29498985 PRJNA1086823_P_NODE_9250_length_280_cov_1.507246_g9133_i0 PRJNA1086823 9250 280 1.507246 4.2202888 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 159 1.35e-46   NR MBA2726772.1 2052176 g9133 i0 81.7 0.996428571428571 93 17 99.6 0 279 1 88 180 MBA2726772.1 efflux RND transporter periplasmic adaptor subunit [Parachlamydiaceae bacterium] diamond 279 159 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31584674 31584674 PRJNA1086823_P_NODE_6676_length_316_cov_1.658436_g6559_i0 PRJNA1086823 6676 316 1.658436 5.24065776 Chlamydiota bacterium 2081524 Bacteria Bacteria 119 4.24e-29   NR NBO24907.1 2081524 g6559 i0 62 1.74683544303797 92 35 87.3 0 1 276 182 273 NBO24907.1 hypothetical protein [Chlamydiota bacterium] diamond 552 119 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;