RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1086823" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 6 ✖

bioproject 1

  • PRJNA1086823 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14222340 14222340 PRJNA1086823_P_NODE_11032_length_262_cov_1.650794_g10915_i0 PRJNA1086823 11032 262 1.650794 4.32508028 Truepera radiovictrix 332249 Bacteria Bacteria 147 1.38e-41   NR WP_013176647.1 332249 g10915 i0 90.8 0.99618320610687 87 8 99.6 0 2 262 123 209 WP_013176647.1 ABC transporter permease [Truepera radiovictrix] diamond 261 147 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
21870639 21870639 PRJNA1086823_P_NODE_19678_length_227_cov_2.025974_g19561_i0 PRJNA1086823 19678 227 2.025974 4.59896098 uncultured Truepera sp. 543023 Bacteria Bacteria 135 6.77e-37   NR CAA9568545.1 543023 g19561 i0 89.2 0.977973568281938 74 8 97.8 0 6 227 25 98 CAA9568545.1 MAG: FIG022979: MoxR-like ATPases [uncultured Truepera sp.] diamond 222 135 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
27130308 27130308 PRJNA1086823_P_NODE_14702_length_249_cov_0.886364_g14585_i0 PRJNA1086823 14702 249 0.886364 2.20704636 Truepera radiovictrix 332249 Bacteria Bacteria 121 1.02e-30   NR WP_013177504.1 332249 g14585 i0 78.3 1 83 17 98.8 1 4 249 220 302 WP_013177504.1 M16 family metallopeptidase [Truepera radiovictrix] diamond 249 121 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
29174933 29174933 PRJNA1086823_P_NODE_15409_length_248_cov_0.891429_g15292_i0 PRJNA1086823 15409 248 0.891429 2.21074392 Bacteria 2 Bacteria Bacteria 47.4 2.47e-4   NR OPZ40892.1 1852916 g15292 i0 36.4 1.57258064516129 66 36 72.6 1 69 248 16 81 OPZ40892.1 MAG: hypothetical protein BWY99_00399 [Synergistetes bacterium ADurb.BinA166] diamond 390 47.4 1 Bacteria   Thermotogati Synergistota         Synergistetes bacterium ADurb.BinA166
31268237 31268237 PRJNA1086823_P_NODE_16815_length_246_cov_0.867052_g16698_i0 PRJNA1086823 16815 246 0.867052 2.13294792 Acetomicrobium 49894 Bacteria Bacteria 171 2.29e-48   NR WP_303882222.1 49894 g16698 i0 98.8 1 82 1 100 0 246 1 35 116 WP_303882222.1 MULTISPECIES: alpha-glucan family phosphorylase [Acetomicrobium] diamond 246 171 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Acetomicrobiaceae Acetomicrobium  
32848614 32848614 PRJNA1086823_P_NODE_8020_length_292_cov_1.680365_g7903_i0 PRJNA1086823 8020 292 1.680365 4.9066658 Synergistetes bacterium ADurb.BinA166 1852916 Bacteria Bacteria 70.9 6.89e-12   NR OPZ37910.1 1852916 g7903 i0 38.5 0.934931506849315 91 56 93.5 0 290 18 50 140 OPZ37910.1 MAG: Glycosyl transferases group 1 [Synergistetes bacterium ADurb.BinA166] diamond 273 70.9 1 Bacteria   Thermotogati Synergistota         Synergistetes bacterium ADurb.BinA166

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;