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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1086823" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJNA1086823 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14222349 14222349 PRJNA1086823_P_NODE_1152_length_705_cov_3.550633_g1042_i0 PRJNA1086823 1152 705 3.550633 25.03196265 root 1 Root_unresolved Root_unresolved 229 6.259999999999999e-72   NR XP_011396691.1 3075 g1042 i0 53.8 14.3914893617021 225 104 95.7 0 24 698 5 229 XP_011396691.1 60S ribosomal protein L7-2 [Auxenochlorella protothecoides] diamond 10146 231 0.991341991341991 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
15496393 15496393 PRJNA1086823_P_NODE_15933_length_247_cov_0.896552_g15816_i0 PRJNA1086823 15933 247 0.896552 2.21448344 Chlorella sorokiniana 3076 Plants Plants 149 1.21e-44   NR PRW57670.1 3076 g15816 i0 90 1.94331983805668 80 8 97.2 0 240 1 1 80 PRW57670.1 Cytochrome c [Chlorella sorokiniana] diamond 480 149 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
15496449 15496449 PRJNA1086823_P_NODE_19013_length_242_cov_0.923077_g18896_i0 PRJNA1086823 19013 242 0.923077 2.23384634 root 1 Root_unresolved Root_unresolved 124 3.969999999999999e-31   NR YP_008816117.1 163317 g18896 i0 78.2 7.8099173553719 78 17 96.7 0 242 9 118 195 YP_008816117.1 ATP synthase F1 subunit alpha [Microspora stagnorum] diamond 1890 125 0.992 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae   Microsporaceae Microspora Microspora stagnorum
24419707 24419707 PRJNA1086823_P_NODE_4300_length_377_cov_5.559211_g4183_i0 PRJNA1086823 4300 377 5.559211 20.95822547 Trebouxia sp. C 2796353 Plants Plants 73.6 5.14e-14   NR KAL0042167.1 2905653 g4183 i0 55.7 1.56763925729443 61 26 47.7 1 331 152 5 65 KAL0042167.1 hypothetical protein WJX77_005300 [Trebouxia sp. C0004] diamond 591 73.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
27794197 27794197 PRJNA1086823_P_NODE_2824_length_454_cov_4.065617_g2707_i0 PRJNA1086823 2824 454 4.065617 18.45790118 Pedinophyceae sp. YPF-7 765719 Plants Plants 102 1.11e-24   NR CAG9460866.1 765719 g2707 i0 46.8 0.931718061674009 141 56 93.2 2 453 31 1 122 CAG9460866.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 423 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
27943454 27943454 PRJNA1086823_P_NODE_15505_length_248_cov_0.891429_g15388_i0 PRJNA1086823 15505 248 0.891429 2.21074392 Viridiplantae 33090 Plants Plants 96.3 1.2499999999999999e-23   NR KAK2076791.1 3111 g15388 i0 66.7 3.25403225806452 63 21 76.2 0 193 5 8 70 KAK2076791.1 iso-1-cytochrome c [Prototheca wickerhamii] diamond 807 97.1 0.991761071060762 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
30352411 30352411 PRJNA1086823_P_NODE_11872_length_254_cov_1.707182_g11755_i0 PRJNA1086823 11872 254 1.707182 4.33624228 Chlamydomonas schloesseri 2026947 Plants Plants 129 1.09e-32   NR KAG2427717.1 2026947 g11755 i0 72.6 2.97637795275591 84 23 99.2 0 252 1 418 501 KAG2427717.1 hypothetical protein HYH02_014548 [Chlamydomonas schloesseri] diamond 756 129 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas schloesseri
30415421 30415421 PRJNA1086823_P_NODE_6813_length_314_cov_0.970954_g6696_i0 PRJNA1086823 6813 314 0.970954 3.04879556 Polytomella sp. Pringsheim 198.80 37502 Plants Plants 48.9 1.22e-4   NR 7AR9_T 37502 g6696 i0 41.8 1.67197452229299 67 34 64 2 112 312 32 93 7AR9_T Chain T, SDAP1 [Polytomella sp. Pringsheim 198.80] diamond 525 48.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
31015368 31015368 PRJNA1086823_P_NODE_16855_length_245_cov_1.802326_g16738_i0 PRJNA1086823 16855 245 1.802326 4.4156987 Trebouxia sp. C 2796353 Plants Plants 111 6.14e-28   NR KAL3159256.1 3373145 g16738 i0 66.3 0.979591836734694 80 27 98 0 2 241 168 247 KAL3159256.1 hypothetical protein ABBQ32_011222 [Trebouxia sp. C0010 RCD-2024] diamond 240 111 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
31101455 31101455 PRJNA1086823_P_NODE_9555_length_277_cov_1.210784_g9438_i0 PRJNA1086823 9555 277 1.210784 3.35387168 Chlamydomonas 3052 Plants Plants 72.8 1.54e-12   NR GAX82928.1 1157962 g9438 i0 48.9 4.4187725631769 92 31 99.6 4 277 2 17 92 GAX82928.1 hypothetical protein CEUSTIGMA_g10355.t1 [Chlamydomonas eustigma] diamond 1224 72.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
31670762 31670762 PRJNA1086823_P_NODE_15917_length_247_cov_0.896552_g15800_i0 PRJNA1086823 15917 247 0.896552 2.21448344 Chlorophyta 3041 Plants Plants 55.1 1.78e-6   NR PSC69832.1 554055 g15800 i0 35.5 5.61133603238866 76 49 92.3 0 241 14 1 76 PSC69832.1 proteasome maturation factor UMP1 family [Micractinium conductrix] diamond 1386 55.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;