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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA1085664" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1085664 · 26 ✖

analysis 1

  • diamond · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13770690 13770690 PRJNA1085664_S_NODE_14171_length_231_cov_1.670213_g13752_i0 PRJNA1085664 14171 231 1.670213 3.85819203 Neogale vison 452646 Chordata Chordata 71.6 1.36e-12   NR XP_044116115.1 452646 g13752 i0 69.4 0.636363636363636 49 15 63.6 0 206 60 272 320 XP_044116115.1 putative olfactory receptor 8G3 pseudogene [Neogale vison] diamond 147 71.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Neogale Neogale vison
26909356 26909356 PRJNA1085664_S_NODE_29002_length_165_cov_1.155738_g28583_i0 PRJNA1085664 29002 165 1.155738 1.9069677 Rhinolophus ferrumequinum 59479 Chordata Chordata 44.7 0.00268   NR ACC62065.1 59479 g28583 i0 48.9 1.63636363636364 45 23 81.8 0 3 137 478 522 ACC62065.1 hypothetical protein [Rhinolophus ferrumequinum] diamond 270 44.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Rhinolophidae Rhinolophus Rhinolophus ferrumequinum
27225355 27225355 PRJNA1085664_S_NODE_11383_length_257_cov_3.140187_g10964_i0 PRJNA1085664 11383 257 3.140187 8.07028059 Bos indicus x Bos taurus 30522 Chordata Chordata 70.1 1.04e-11   NR XP_027375161.1 30522 g10964 i0 77 1.01556420233463 87 18 99.2 1 1 255 380 466 XP_027375161.1 5E5 antigen-like [Bos indicus x Bos taurus] diamond 261 70.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus x Bos taurus
27478301 27478301 PRJNA1085664_S_NODE_36203_length_151_cov_0.888889_g35784_i0 PRJNA1085664 36203 151 0.888889 1.34222239 Mirounga leonina 9715 Chordata Chordata 42.7 0.0103   NR KAF3827309.1 9715 g35784 i0 82.6 0.456953642384106 23 4 45.7 0 63 131 474 496 KAF3827309.1 hypothetical protein GH733_002795 [Mirounga leonina] diamond 69 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Phocidae Mirounga Mirounga leonina
27532878 27532878 PRJNA1085664_S_NODE_22903_length_183_cov_1.714286_g22484_i0 PRJNA1085664 22903 183 1.714286 3.13714338 Myotis 9434 Chordata Chordata 53.9 1.98e-6   NR XP_059562598.1 98922 g22484 i0 78.7 2 61 13 100 0 183 1 645 705 XP_059562598.1 ankyrin repeat domain-containing protein 12 isoform X5 [Myotis daubentonii] diamond 366 53.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Vespertilionidae Myotis Myotis daubentonii
27825729 27825729 PRJNA1085664_S_NODE_9544_length_281_cov_1.810924_g9125_i0 PRJNA1085664 9544 281 1.810924 5.08869644 Trichechus manatus latirostris 127582 Chordata Chordata 50.4 1.09e-4   NR XP_023588091.1 127582 g9125 i0 53.5 1.5373665480427 43 20 45.9 0 153 281 339 381 XP_023588091.1 nucleoporin NUP42 isoform X3 [Trichechus manatus latirostris] diamond 432 50.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Sirenia Trichechidae Trichechus Trichechus manatus
27983453 27983453 PRJNA1085664_S_NODE_36545_length_151_cov_0.888889_g36126_i0 PRJNA1085664 36545 151 0.888889 1.34222239 Sus scrofa 9823 Chordata Chordata 41.6 0.0272   NR XP_013836702.1 9823 g36126 i0 65.5 0.576158940397351 29 10 57.6 0 150 64 26 54 XP_013836702.1 sperm-associated antigen 7 isoform X1 [Sus scrofa] diamond 87 41.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
28109639 28109639 PRJNA1085664_S_NODE_25345_length_175_cov_1.818182_g24926_i0 PRJNA1085664 25345 175 1.818182 3.1818185 Halichoerus grypus 9711 Chordata Chordata 49.7 2.94e-5   NR XP_035920310.1 9711 g24926 i0 55 0.685714285714286 40 18 68.6 0 128 9 139 178 XP_035920310.1 uncharacterized protein LOC118518013 isoform X2 [Halichoerus grypus] diamond 120 49.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Phocidae Halichoerus Halichoerus grypus
28520355 28520355 PRJNA1085664_S_NODE_35227_length_152_cov_0.880734_g34808_i0 PRJNA1085664 35227 152 0.880734 1.33871568 Camelus ferus 419612 Chordata Chordata 49.7 3.81e-5   NR EPY82171.1 419612 g34808 i0 71.9 0.631578947368421 32 9 63.2 0 13 108 172 203 EPY82171.1 actin-binding LIM protein 1 isoform 5-like protein [Camelus ferus] diamond 96 49.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Camelidae Camelus Camelus ferus
28898965 28898965 PRJNA1085664_S_NODE_12088_length_250_cov_1.855072_g11669_i0 PRJNA1085664 12088 250 1.855072 4.63768 Diceros bicornis minor 77932 Chordata Chordata 42.7 0.0311   NR XP_058411710.1 77932 g11669 i0 54.3 0.84 35 16 42 0 136 240 150 184 XP_058411710.1 uncharacterized protein LOC131414684 isoform X1 [Diceros bicornis minor] diamond 210 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Perissodactyla Rhinocerotidae Diceros Diceros bicornis
28898966 28898966 PRJNA1085664_S_NODE_25588_length_174_cov_3.297710_g25169_i0 PRJNA1085664 25588 174 3.29771 5.7380154 Manis javanica 9974 Chordata Chordata 42.4 0.0194   NR KAI5942576.1 9974 g25169 i0 58.8 1.81034482758621 34 14 58.6 0 156 55 73 106 KAI5942576.1 LINE-1 retrotransposable element ORF1 protein [Manis javanica] diamond 315 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Pholidota Manidae Manis Manis javanica
28921994 28921994 PRJNA1085664_S_NODE_32748_length_156_cov_1.265487_g32329_i0 PRJNA1085664 32748 156 1.265487 1.97415972 Carnivora 33554 Chordata Chordata 41.2 0.0398   NR XP_012913798.1 9669 g32329 i0 54.5 1.82692307692308 33 15 63.5 0 101 3 554 586 XP_012913798.1 mitofusin-1 isoform X2 [Mustela putorius furo] diamond 285 41.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Mustela Mustela putorius
29183490 29183490 PRJNA1085664_S_NODE_30769_length_160_cov_1.641026_g30350_i0 PRJNA1085664 30769 160 1.641026 2.6256416 Oryctolagus cuniculus 9986 Chordata Chordata 45.1 0.00175   NR XP_069909281.1 9986 g30350 i0 48.6 0.69375 37 19 69.4 0 30 140 14 50 XP_069909281.1 uncharacterized protein [Oryctolagus cuniculus] diamond 111 45.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Oryctolagus Oryctolagus cuniculus
29751365 29751365 PRJNA1085664_S_NODE_30551_length_161_cov_1.084746_g30132_i0 PRJNA1085664 30551 161 1.084746 1.74644106 Sagmatias obliquidens 3371155 Chordata Chordata 61.6 2.65e-9   NR XP_026943587.1 3371155 g30132 i0 67.3 0.91304347826087 49 13 85.7 1 2 139 659 707 XP_026943587.1 lysine-specific demethylase 4D-like [Sagmatias obliquidens] diamond 147 61.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Sagmatias Sagmatias obliquidens
30067428 30067428 PRJNA1085664_S_NODE_15932_length_218_cov_1.371429_g15513_i0 PRJNA1085664 15932 218 1.371429 2.98971522 Meles meles 9662 Chordata Chordata 52.8 8.05e-6   NR XP_045881491.1 9662 g15513 i0 36.9 1.85779816513761 65 40 88.1 1 5 196 1848 1912 XP_045881491.1 LOW QUALITY PROTEIN: uncharacterized protein LOC123954405 [Meles meles] diamond 405 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Meles Meles meles
30257415 30257415 PRJNA1085664_S_NODE_11592_length_255_cov_2.613208_g11173_i0 PRJNA1085664 11592 255 2.613208 6.6636804 Crocuta crocuta 9678 Chordata Chordata 47.4 3.47e-4   NR KAF0876880.1 9678 g11173 i0 57.1 0.811764705882353 35 15 41.2 0 133 29 13 47 KAF0876880.1 LORF2 protein, partial [Crocuta crocuta] diamond 207 47.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Hyaenidae Crocuta Crocuta crocuta
30699320 30699320 PRJNA1085664_S_NODE_33714_length_154_cov_1.252252_g33295_i0 PRJNA1085664 33714 154 1.252252 1.92846808 Cervus elaphus hippelaphus 46360 Chordata Chordata 51.6 6.01e-6   NR OWK16157.1 46360 g33295 i0 84 0.487012987012987 25 4 48.7 0 80 154 179 203 OWK16157.1 hypothetical protein Celaphus_00003981 [Cervus elaphus hippelaphus] diamond 75 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Cervus Cervus elaphus
31109962 31109962 PRJNA1085664_S_NODE_19295_length_198_cov_2.477419_g18876_i0 PRJNA1085664 19295 198 2.477419 4.90528962 Eumetopias jubatus 34886 Chordata Chordata 46.2 0.00127   NR XP_027969646.1 34886 g18876 i0 71 1.40909090909091 31 9 47 0 106 198 96 126 XP_027969646.1 pachytene checkpoint protein 2 homolog [Eumetopias jubatus] diamond 279 46.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Otariidae Eumetopias Eumetopias jubatus
31268233 31268233 PRJNA1085664_S_NODE_21615_length_188_cov_1.986207_g21196_i0 PRJNA1085664 21615 188 1.986207 3.73406916 Eschrichtius robustus 9764 Chordata Chordata 73.2 3.3e-13   NR KAJ8791547.1 9764 g21196 i0 75.8 0.98936170212766 62 15 98.9 0 1 186 299 360 KAJ8791547.1 hypothetical protein J1605_020643 [Eschrichtius robustus] diamond 186 73.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
31458120 31458120 PRJNA1085664_S_NODE_37116_length_150_cov_1.130841_g36697_i0 PRJNA1085664 37116 150 1.130841 1.6962615 Sus scrofa 9823 Chordata Chordata 51.6 4.21e-6   NR XP_020945645.1 9823 g36697 i0 100 1.36 34 0 68 0 1 102 5 38 XP_020945645.1 proline-rich protein 18-like isoform X3 [Sus scrofa] diamond 204 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
31742525 31742525 PRJNA1085664_S_NODE_23577_length_181_cov_1.391304_g23158_i0 PRJNA1085664 23577 181 1.391304 2.51826024 Phyllostomus discolor 89673 Chordata Chordata 42.4 0.00947   NR KAF6125225.1 89673 g23158 i0 48.7 0.646408839779006 39 19 63 1 33 146 88 126 KAF6125225.1 hypothetical protein HJG60_009746 [Phyllostomus discolor] diamond 117 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Phyllostomidae Phyllostomus Phyllostomus discolor
31828743 31828743 PRJNA1085664_S_NODE_30897_length_160_cov_1.230769_g30478_i0 PRJNA1085664 30897 160 1.230769 1.9692304 Mammalia 40674 Chordata Chordata 50.8 1.16e-5   NR KAI5947274.1 9974 g30478 i0 48.1 6.84375 52 27 97.5 0 160 5 60 111 KAI5947274.1 LINE-1 retrotransposable element ORF2 protein [Manis javanica] diamond 1095 50.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Pholidota Manidae Manis Manis javanica
31963994 31963994 PRJNA1085664_S_NODE_36198_length_151_cov_0.888889_g35779_i0 PRJNA1085664 36198 151 0.888889 1.34222239 Elephas maximus indicus 99487 Chordata Chordata 50.4 8.66e-6   NR XP_049722511.1 99487 g35779 i0 82.1 0.556291390728477 28 5 55.6 0 34 117 74 101 XP_049722511.1 RING finger protein 122 isoform X1 [Elephas maximus indicus] diamond 84 50.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Proboscidea Elephantidae Elephas Elephas maximus
32470553 32470553 PRJNA1085664_S_NODE_36999_length_150_cov_1.345794_g36580_i0 PRJNA1085664 36999 150 1.345794 2.018691 Eschrichtius robustus 9764 Chordata Chordata 46.6 4.2e-4   NR KAJ8784093.1 9764 g36580 i0 69.4 0.72 36 10 70 1 28 132 145 180 KAJ8784093.1 hypothetical protein J1605_008593 [Eschrichtius robustus] diamond 108 46.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
32565556 32565556 PRJNA1085664_S_NODE_23499_length_181_cov_1.811594_g23080_i0 PRJNA1085664 23499 181 1.811594 3.27898514 Camelus dromedarius 9838 Chordata Chordata 43.5 0.00898   NR KAB1268256.1 9838 g23080 i0 54.8 0.696132596685083 42 19 69.6 0 44 169 1 42 KAB1268256.1 hypothetical protein Cadr_000013791 [Camelus dromedarius] diamond 126 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Camelidae Camelus Camelus dromedarius
32691070 32691070 PRJNA1085664_S_NODE_10960_length_263_cov_1.309091_g10541_i0 PRJNA1085664 10960 263 1.309091 3.44290933 Smutsia gigantea 1559511 Chordata Chordata 42.7 0.0273   NR KAK2495661.1 1559511 g10541 i0 44 0.570342205323194 50 27 55.9 1 104 250 16 65 KAK2495661.1 hypothetical protein MC885_018523, partial [Smutsia gigantea] diamond 150 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Pholidota Manidae Smutsia Smutsia gigantea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;