RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1078753" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJNA1078753 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28141575 28141575 PRJNA1078753_P_NODE_9105_length_368_cov_1.044068_g8909_i0 PRJNA1078753 9105 368 1.044068 3.84217024 Serratia phage vB_SmaS_Serratianator 2777362 Viruses Viruses 167 1.87e-45   NR QPX74427.1 2777362 g8909 i0 65.9 1.00271739130435 123 41 99.5 1 368 3 212 334 QPX74427.1 putative bifunctional DNA primase/polymerase domain protein [Serratia phage vB_SmaS_Serratianator] diamond 369 167 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Serratia phage vB_SmaS_Serratianator
29364306 29364306 PRJNA1078753_P_NODE_25109_length_258_cov_1.318919_g24913_i0 PRJNA1078753 25109 258 1.318919 3.40281102 Menderavirus 2843421 Viruses Viruses 43.1 0.0252   NR YP_010077781.1 1654717 g24913 i0 37.1 1.44186046511628 62 38 70.9 1 17 199 42 103 YP_010077781.1 hypothetical protein KMC40_gp170 [Stenotrophomonas phage IME-SM1] diamond 372 43.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Menderavirus Menderavirus IMESM1
29941292 29941292 PRJNA1078753_P_NODE_40431_length_243_cov_0.905882_g40235_i0 PRJNA1078753 40431 243 0.905882 2.20129326 Rhodococcus phage NiceHouse 2743998 Viruses Viruses 119 1.61e-30   NR QLF83304.1 2743998 g40235 i0 72.2 0.975308641975309 79 22 97.5 0 239 3 55 133 QLF83304.1 major capsid protein [Rhodococcus phage NiceHouse] diamond 237 119 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Trinavirus Rhodococcus phage NiceHouse
31869046 31869046 PRJNA1078753_P_NODE_27897_length_251_cov_0.865169_g27701_i0 PRJNA1078753 27897 251 0.865169 2.17157419 Caudoviricetes sp. 2832643 Viruses Viruses 98.6 3.07e-23   NR XOR73517.1 2832643 g27701 i0 62.3 0.920318725099602 77 29 92 0 250 20 153 229 XOR73517.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 231 98.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;