RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1074407" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1074407 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30920710 30920710 PRJNA1074407_P_NODE_88874_length_392_cov_0.890282_g85037_i0 PRJNA1074407 88874 392 0.890282 3.48990544 Planctomycetota bacterium 2026780 Bacteria Bacteria 45.1 0.0277   NR MFM1802915.1 2026780 g85037 i0 44.6 0.428571428571429 56 23 36.7 2 194 337 140 195 MFM1802915.1 hypothetical protein [Planctomycetota bacterium] diamond 168 45.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31078623 31078623 PRJNA1074407_P_NODE_116475_length_297_cov_1.017857_g112637_i0 PRJNA1074407 116475 297 1.017857 3.02303529 Planctomycetota bacterium 2026780 Bacteria Bacteria 99 1.25e-21   NR MDA3962851.1 2026780 g112637 i0 52.6 0.97979797979798 97 37 98 1 296 6 705 792 MDA3962851.1 ATP-dependent chaperone ClpB [Planctomycetota bacterium] diamond 291 99 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;