RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA1074407" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1074407 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31742458 31742458 PRJNA1074407_P_NODE_95997_length_362_cov_2.276817_g92160_i0 PRJNA1074407 95997 362 2.276817 8.24207754 Macrobrachium rosenbergii hepe-like virus 3 3132532 Viruses Viruses 234 1.5299999999999999e-68   NR WWZ85572.1 3132532 g92160 i0 98.3 0.994475138121547 120 2 99.4 0 360 1 1325 1444 WWZ85572.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii hepe-like virus 3] diamond 360 234 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Hepeviridae   Macrobrachium rosenbergii hepe-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;