contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA1074407" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29435512 | 29435512 | PRJNA1074407_P_NODE_142970_length_243_cov_0.894118_g139132_i0 | PRJNA1074407 | 142970 | 243 | 0.894118 | 2.17270674 | Corynebacterium sp. | 1720 | Bacteria | Bacteria | 134 | 1.3499999999999999e-34 | NR | WP_303197361.1 | 1720 | g139132 | i0 | 87.7 | 6 | 81 | 10 | 100 | 0 | 1 | 243 | 469 | 549 | WP_303197361.1 dipeptide ABC transporter ATP-binding protein [Corynebacterium sp.] | diamond | 1458 | 134 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. | ||
| 31521255 | 31521255 | PRJNA1074407_P_NODE_124616_length_275_cov_1.287129_g120778_i0 | PRJNA1074407 | 124616 | 275 | 1.287129 | 3.53960475 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 57.4 | 3.7e-7 | NR | MES6339244.1 | 1747 | g120778 | i0 | 41.5 | 5.34545454545455 | 82 | 38 | 79.6 | 2 | 221 | 3 | 174 | 254 | MES6339244.1 reverse transcriptase family protein [Cutibacterium acnes] | diamond | 1470 | 57.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 31774075 | 31774075 | PRJNA1074407_P_NODE_101417_length_343_cov_1.570370_g97579_i0 | PRJNA1074407 | 101417 | 343 | 1.57037 | 5.3863691 | Kocuria varians | 1272 | Bacteria | Bacteria | 45.1 | 0.0161 | NR | WP_094394452.1 | 1272 | g97579 | i0 | 43.5 | 0.402332361516035 | 46 | 26 | 40.2 | 0 | 131 | 268 | 79 | 124 | WP_094394452.1 amidohydrolase family protein [Kocuria varians] | diamond | 138 | 45.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Kocuria | Kocuria varians | ||
| 31900713 | 31900713 | PRJNA1074407_P_NODE_127537_length_267_cov_1.567010_g123699_i0 | PRJNA1074407 | 127537 | 267 | 1.56701 | 4.1839167 | Mycolicibacterium obuense | 1807 | Bacteria | Bacteria | 153 | 6e-43 | NR | WP_046365628.1 | 1807 | g123699 | i0 | 89.8 | 0.98876404494382 | 88 | 9 | 98.9 | 0 | 266 | 3 | 245 | 332 | WP_046365628.1 ABC transporter ATP-binding protein [Mycolicibacterium obuense] | diamond | 264 | 153 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium obuense | ||
| 32122394 | 32122394 | PRJNA1074407_P_NODE_136178_length_248_cov_1.302857_g132340_i0 | PRJNA1074407 | 136178 | 248 | 1.302857 | 3.23108536 | Arcanobacterium haemolyticum | 28264 | Bacteria | Bacteria | 42.4 | 0.0473 | NR | WP_113723090.1 | 28264 | g132340 | i0 | 51.3 | 0.471774193548387 | 39 | 19 | 47.2 | 0 | 158 | 42 | 13 | 51 | WP_113723090.1 type I-E CRISPR-associated protein Cas5/CasD, partial [Arcanobacterium haemolyticum] | diamond | 117 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Arcanobacterium | Arcanobacterium haemolyticum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;