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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA1074407" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_kingdom 1

  • Bacillati · 16 ✖

bioproject 1

  • PRJNA1074407 · 16 ✖

analysis 1

  • diamond · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6119507 6119507 PRJNA1074407_P_NODE_143845_length_242_cov_0.899408_g140007_i0 PRJNA1074407 143845 242 0.899408 2.17656736 Synechocystis sp. PCC 75 1143 Bacteria Bacteria 141 3.2499999999999996e-37   NR WP_009631222.1 927677 g140007 i0 87.5 0.991735537190083 80 10 99.2 0 2 241 500 579 WP_009631222.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG [Synechocystis sp. PCC 7509] diamond 240 141 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Merismopediaceae Synechocystis Synechocystis sp. PCC 7509
9117970 9117970 PRJNA1074407_P_NODE_69548_length_494_cov_1.622328_g65716_i0 PRJNA1074407 69548 494 1.622328 8.01430032 root 1 Root_unresolved Root_unresolved 83.2 3.42e-16   NR WP_203200704.1 1307 g65716 i0 58.2 6.51012145748988 67 28 40.7 0 332 132 118 184 WP_203200704.1 hypothetical protein, partial [Streptococcus suis] diamond 3216 84 0.990476190476191 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus suis
26774214 26774214 PRJNA1074407_P_NODE_142401_length_243_cov_0.894118_g138563_i0 PRJNA1074407 142401 243 0.894118 2.17270674 Cyanophyceae 3028117 Bacteria Bacteria 43.1 0.0283   NR MBW4630409.1 1494767 g138563 i0 36.7 1.97530864197531 79 40 92.6 2 237 13 368 440 MBW4630409.1 peptidase domain-containing ABC transporter [Iphinoe sp. HA4291-MV1] diamond 480 43.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Stigonemataceae Iphinoe Iphinoe sp. HA4291-MV1
27035795 27035795 PRJNA1074407_P_NODE_137222_length_247_cov_3.218391_g133384_i0 PRJNA1074407 137222 247 3.218391 7.94942577 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 41.2 0.0427   NR MBE6810904.1 2485925 g133384 i0 45 0.48582995951417 40 18 48.6 1 127 8 19 54 MBE6810904.1 zinc ribbon domain-containing protein [Oscillospiraceae bacterium] diamond 120 41.2 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
27667830 27667830 PRJNA1074407_P_NODE_71724_length_480_cov_0.958231_g67892_i0 PRJNA1074407 71724 480 0.958231 4.5995088 Candidatus Mycoplasma haematobovis 432608 Bacteria Bacteria 45.4 0.0396   NR WP_187150123.1 432608 g67892 i0 26.9 0.74375 119 77 68.8 6 417 88 50 167 WP_187150123.1 helix-turn-helix domain-containing protein [Candidatus Mycoplasma haematobovis] diamond 357 45.4 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Candidatus Mycoplasma haematobovis
27920196 27920196 PRJNA1074407_P_NODE_144445_length_241_cov_1.380952_g140607_i0 PRJNA1074407 144445 241 1.380952 3.32809432 Cyanobium sp. 2164130 Bacteria Bacteria 49.3 1.76e-4   NR MFN4864930.1 2164130 g140607 i0 44.2 0.535269709543568 43 24 53.5 0 11 139 60 102 MFN4864930.1 class I adenylate-forming enzyme family protein [Cyanobium sp.] diamond 129 49.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Prochlorococcaceae Cyanobium Cyanobium sp.
28204196 28204196 PRJNA1074407_P_NODE_111626_length_310_cov_4.430380_g107788_i0 PRJNA1074407 111626 310 4.43038 13.734178 Veillonella sp. 1926307 Bacteria Bacteria 160 1.28e-48   NR WP_366512514.1 1926307 g107788 i0 73.5 1.9741935483871 102 27 98.7 0 309 4 4 105 WP_366512514.1 hypothetical protein [Veillonella sp.] diamond 612 160 1 Bacteria   Bacillati Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella sp.
29435512 29435512 PRJNA1074407_P_NODE_142970_length_243_cov_0.894118_g139132_i0 PRJNA1074407 142970 243 0.894118 2.17270674 Corynebacterium sp. 1720 Bacteria Bacteria 134 1.3499999999999999e-34   NR WP_303197361.1 1720 g139132 i0 87.7 6 81 10 100 0 1 243 469 549 WP_303197361.1 dipeptide ABC transporter ATP-binding protein [Corynebacterium sp.] diamond 1458 134 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium Corynebacterium sp.
29941242 29941242 PRJNA1074407_P_NODE_71351_length_482_cov_1.633252_g67519_i0 PRJNA1074407 71351 482 1.633252 7.87227464 Erysipelatoclostridium sp. An173 1965571 Bacteria Bacteria 46.2 0.0262   NR WP_087370850.1 1965571 g67519 i0 26.4 0.871369294605809 140 92 80.9 4 422 33 488 626 WP_087370850.1 discoidin domain-containing protein [Erysipelatoclostridium sp. An173] diamond 420 46.2 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Coprobacillaceae Thomasclavelia Erysipelatoclostridium sp. An173
31331309 31331309 PRJNA1074407_P_NODE_55196_length_619_cov_1.789377_g51404_i0 PRJNA1074407 55196 619 1.789377 11.07624363 Lactobacillales bacterium 1993866 Bacteria Bacteria 46.2 0.0169   NR MBE6159497.1 1993866 g51404 i0 29.8 0.455573505654281 94 53 39.3 2 386 144 49 142 MBE6159497.1 hypothetical protein [Lactobacillales bacterium] diamond 282 46.2 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales     Lactobacillales bacterium
31521255 31521255 PRJNA1074407_P_NODE_124616_length_275_cov_1.287129_g120778_i0 PRJNA1074407 124616 275 1.287129 3.53960475 Cutibacterium acnes 1747 Bacteria Bacteria 57.4 3.7e-7   NR MES6339244.1 1747 g120778 i0 41.5 5.34545454545455 82 38 79.6 2 221 3 174 254 MES6339244.1 reverse transcriptase family protein [Cutibacterium acnes] diamond 1470 57.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium Cutibacterium acnes
31774075 31774075 PRJNA1074407_P_NODE_101417_length_343_cov_1.570370_g97579_i0 PRJNA1074407 101417 343 1.57037 5.3863691 Kocuria varians 1272 Bacteria Bacteria 45.1 0.0161   NR WP_094394452.1 1272 g97579 i0 43.5 0.402332361516035 46 26 40.2 0 131 268 79 124 WP_094394452.1 amidohydrolase family protein [Kocuria varians] diamond 138 45.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Kocuria Kocuria varians
31868993 31868993 PRJNA1074407_P_NODE_142437_length_243_cov_0.894118_g138599_i0 PRJNA1074407 142437 243 0.894118 2.17270674 Chlorogloea sp. CCALA 695 2107693 Bacteria Bacteria 139 1.0099999999999999e-38   NR WP_106368637.1 2107693 g138599 i0 91.3 0.987654320987654 80 7 98.8 0 241 2 106 185 WP_106368637.1 YaaW family protein [Chlorogloea sp. CCALA 695] diamond 240 139 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Entophysalidaceae Chlorogloea Chlorogloea sp. CCALA 695
31900713 31900713 PRJNA1074407_P_NODE_127537_length_267_cov_1.567010_g123699_i0 PRJNA1074407 127537 267 1.56701 4.1839167 Mycolicibacterium obuense 1807 Bacteria Bacteria 153 6e-43   NR WP_046365628.1 1807 g123699 i0 89.8 0.98876404494382 88 9 98.9 0 266 3 245 332 WP_046365628.1 ABC transporter ATP-binding protein [Mycolicibacterium obuense] diamond 264 153 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycolicibacterium Mycolicibacterium obuense
32122394 32122394 PRJNA1074407_P_NODE_136178_length_248_cov_1.302857_g132340_i0 PRJNA1074407 136178 248 1.302857 3.23108536 Arcanobacterium haemolyticum 28264 Bacteria Bacteria 42.4 0.0473   NR WP_113723090.1 28264 g132340 i0 51.3 0.471774193548387 39 19 47.2 0 158 42 13 51 WP_113723090.1 type I-E CRISPR-associated protein Cas5/CasD, partial [Arcanobacterium haemolyticum] diamond 117 42.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Arcanobacterium Arcanobacterium haemolyticum
32690971 32690971 PRJNA1074407_P_NODE_141420_length_244_cov_0.888889_g137582_i0 PRJNA1074407 141420 244 0.888889 2.16888916 Clostridiales bacterium 1898207 Bacteria Bacteria 119 6.79e-30   NR NTV77889.1 1898207 g137582 i0 63 1.99180327868852 81 30 99.6 0 2 244 51 131 NTV77889.1 hypothetical protein [Clostridiales bacterium] diamond 486 119 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;