RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1073712" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1073712 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28488655 28488655 PRJNA1073712_P_NODE_3467_length_376_cov_3.851485_g3384_i0 PRJNA1073712 3467 376 3.851485 14.4815836 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 103 1.76e-25   NR BBE07976.1 1928728 g3384 i0 47.3 0.893617021276596 112 49 83.8 2 26 340 5 113 BBE07976.1 LIM and SH3 domain protein [Paulinella micropora] diamond 336 103 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora
28994050 28994050 PRJNA1073712_P_NODE_14408_length_245_cov_0.895349_g14325_i0 PRJNA1073712 14408 245 0.895349 2.19360505 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 75.5 1.14e-13   NR MES1911902.1 1215613 g14325 i0 47.8 0.844897959183673 69 36 84.5 0 11 217 942 1010 MES1911902.1 hypothetical protein [Cercozoa sp. M6MM] diamond 207 75.5 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;