RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1073712" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1073712 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30248728 30248728 PRJNA1073712_P_NODE_15632_length_243_cov_0.905882_g15549_i0 PRJNA1073712 15632 243 0.905882 2.20129326 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 157 1.4e-42   NR TWP21065.1 713049 g15549 i0 97.5 2 81 2 100 0 243 1 192 272 TWP21065.1 hypothetical protein EUA61_02825, partial [TM7 phylum sp. oral taxon 346] diamond 486 158 0.993670886075949 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 346
30667697 30667697 PRJNA1073712_P_NODE_11813_length_250_cov_0.870056_g11730_i0 PRJNA1073712 11813 250 0.870056 2.17514 Candidatus Nanosynbacter sp. 2725945 Bacteria Bacteria 174 1.46e-53   NR MBF1032387.1 2725945 g11730 i0 98.8 0.996 83 1 99.6 0 249 1 42 124 MBF1032387.1 hypothetical protein [Candidatus Nanosynbacter sp.] diamond 249 174 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp.
30888903 30888903 PRJNA1073712_P_NODE_7514_length_288_cov_1.279070_g7431_i0 PRJNA1073712 7514 288 1.27907 3.6837216 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 98.2 3.87e-22   NR MBP5511993.1 2026720 g7431 i0 78 0.614583333333333 59 13 61.5 0 110 286 1 59 MBP5511993.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 177 98.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;