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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1073183" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1073183 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23139383 23139383 PRJNA1073183_P_NODE_15139_length_335_cov_1.175573_g15044_i0 PRJNA1073183 15139 335 1.175573 3.93816955 Rhabditida 6236 Nematoda Nematoda 171 2.15e-47   NR VDO71113.1 6339 g15044 i0 82.2 34.7194029850746 107 19 95.8 0 15 335 312 418 VDO71113.1 unnamed protein product [Heligmosomoides polygyrus] diamond 11631 171 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
26940745 26940745 PRJNA1073183_P_NODE_32342_length_244_cov_0.900585_g32247_i0 PRJNA1073183 32342 244 0.900585 2.1974274 Aphelenchoides fujianensis 1052528 Nematoda Nematoda 43.9 0.0145   NR KAI6234642.1 1052528 g32247 i0 35.8 0.995901639344262 81 50 99.6 1 1 243 295 373 KAI6234642.1 Tftc-1 [Aphelenchoides fujianensis] diamond 243 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides fujianensis
27785684 27785684 PRJNA1073183_P_NODE_22544_length_276_cov_1.137931_g22449_i0 PRJNA1073183 22544 276 1.137931 3.14068956 Steinernema 34507 Nematoda Nematoda 89 3.24e-18   NR TKR73105.1 34508 g22449 i0 48.4 5 91 43 98.9 2 276 4 204 290 TKR73105.1 hypothetical protein L596_020456 [Steinernema carpocapsae] diamond 1380 89 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
28109548 28109548 PRJNA1073183_P_NODE_4305_length_609_cov_2.035448_g4213_i0 PRJNA1073183 4305 609 2.035448 12.39587832 Aphelenchoides bicaudatus 293665 Nematoda Nematoda 217 9.86e-68   NR KAI6182696.1 293665 g4213 i0 61.2 0.901477832512315 183 69 90.1 1 557 9 15 195 KAI6182696.1 Ribosomal protein L1 domain containing protein [Aphelenchoides bicaudatus] diamond 549 217 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
28678141 28678141 PRJNA1073183_P_NODE_17507_length_313_cov_0.962500_g17412_i0 PRJNA1073183 17507 313 0.9625 3.012625 Aphelenchoides bicaudatus 293665 Nematoda Nematoda 117 4.66e-30   NR KAI6182696.1 293665 g17412 i0 62 4.39936102236422 92 35 88.2 0 276 1 15 106 KAI6182696.1 Ribosomal protein L1 domain containing protein [Aphelenchoides bicaudatus] diamond 1377 117 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
28898854 28898854 PRJNA1073183_P_NODE_34568_length_241_cov_0.916667_g34473_i0 PRJNA1073183 34568 241 0.916667 2.20916747 Meloidogyne enterolobii 390850 Nematoda Nematoda 87.8 1.71e-19   NR CAD2140840.1 390850 g34473 i0 55.4 2.81327800829876 74 32 90.9 1 219 1 1 74 CAD2140840.1 unnamed protein product [Meloidogyne enterolobii] diamond 678 87.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
28953938 28953938 PRJNA1073183_P_NODE_31488_length_245_cov_0.895349_g31393_i0 PRJNA1073183 31488 245 0.895349 2.19360505 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 68.2 3.89e-11   NR CAJ0559936.1 96644 g31393 i0 40.7 10.9591836734694 81 46 96.7 1 239 3 192 272 CAJ0559936.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 2685 68.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
29143425 29143425 PRJNA1073183_P_NODE_9649_length_412_cov_4.020649_g9555_i0 PRJNA1073183 9649 412 4.020649 16.56507388 Opisthokonta 33154 Nematoda Nematoda 90.9 5.93e-19   NR VDD94551.1 51028 g9555 i0 40 14.4684466019417 120 70 87.4 2 377 18 7 124 VDD94551.1 unnamed protein product [Enterobius vermicularis] diamond 5961 90.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Oxyuridae Enterobius Enterobius vermicularis
29719693 29719693 PRJNA1073183_P_NODE_8770_length_431_cov_1.720670_g8676_i0 PRJNA1073183 8770 431 1.72067 7.4160877 Meloidogyne graminicola 189291 Nematoda Nematoda 82.4 1.09e-15   NR AVZ46778.1 189291 g8676 i0 54.3 0.563805104408353 81 37 56.4 0 182 424 117 197 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 243 82.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
30509719 30509719 PRJNA1073183_P_NODE_23833_length_267_cov_1.587629_g23738_i0 PRJNA1073183 23833 267 1.587629 4.23896943 Loa loa 7209 Nematoda Nematoda 63.5 2.27e-9   NR XP_003147055.2 7209 g23738 i0 39.1 2.32584269662921 69 42 77.5 0 255 49 235 303 XP_003147055.2 hypothetical protein LOAG_11489 [Loa loa] diamond 621 63.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa
31679140 31679140 PRJNA1073183_P_NODE_10457_length_396_cov_3.040248_g10363_i0 PRJNA1073183 10457 396 3.040248 12.03938208 Pristionchus fissidentatus 1538716 Nematoda Nematoda 92.8 2.7400000000000004e-21   NR GMT18625.1 1538716 g10363 i0 42 0.992424242424242 131 70 98.5 3 390 1 1 126 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 393 92.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;