contig_metadata
19 rows where analysis = "diamond", bioproject = "PRJNA1073183" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26718833 | 26718833 | PRJNA1073183_P_NODE_8661_length_434_cov_1.052632_g8567_i0 | PRJNA1073183 | 8661 | 434 | 1.052632 | 4.56842288 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 67.8 | 4.83e-10 | NR | MCI7805223.1 | 2485925 | g8567 | i0 | 42.1 | 0.73963133640553 | 107 | 54 | 69.1 | 3 | 112 | 411 | 15 | 120 | MCI7805223.1 SH3 domain-containing protein [Oscillospiraceae bacterium] | diamond | 321 | 67.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 27003979 | 27003979 | PRJNA1073183_P_NODE_27142_length_250_cov_0.870056_g27047_i0 | PRJNA1073183 | 27142 | 250 | 0.870056 | 2.17514 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 43.5 | 0.00307 | NR | MBR5404772.1 | 2485925 | g27047 | i0 | 44.7 | 0.564 | 47 | 26 | 56.4 | 0 | 109 | 249 | 16 | 62 | MBR5404772.1 KH domain-containing protein [Oscillospiraceae bacterium] | diamond | 141 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 27257033 | 27257033 | PRJNA1073183_P_NODE_8743_length_432_cov_1.272981_g8649_i0 | PRJNA1073183 | 8743 | 432 | 1.272981 | 5.49927792 | Gracilibacillus dipsosauri | 178340 | Bacteria | Bacteria | 122 | 1.14e-29 | NR | WP_277680174.1 | 178340 | g8649 | i0 | 52 | 2.02777777777778 | 98 | 47 | 68.1 | 0 | 50 | 343 | 232 | 329 | WP_277680174.1 pyridoxal phosphate-dependent decarboxylase family protein [Gracilibacillus dipsosauri] | diamond | 876 | 122 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Gracilibacillus | Gracilibacillus dipsosauri | ||
| 27415313 | 27415313 | PRJNA1073183_P_NODE_20383_length_289_cov_1.425926_g20288_i0 | PRJNA1073183 | 20383 | 289 | 1.425926 | 4.12092614 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 93.2 | 1.2e-19 | NR | GHU57210.1 | 2044939 | g20288 | i0 | 58.2 | 0.820069204152249 | 79 | 32 | 81 | 1 | 14 | 247 | 124 | 202 | GHU57210.1 hypothetical protein AGMMS49975_22260 [Clostridia bacterium] | diamond | 237 | 93.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 27415321 | 27415321 | PRJNA1073183_P_NODE_30783_length_246_cov_0.890173_g30688_i0 | PRJNA1073183 | 30783 | 246 | 0.890173 | 2.18982558 | Heyndrickxia ginsengihumi | 363870 | Bacteria | Bacteria | 87 | 3.63e-20 | NR | WP_025728619.1 | 363870 | g30688 | i0 | 97.5 | 0.48780487804878 | 40 | 1 | 48.8 | 0 | 126 | 245 | 1 | 40 | WP_025728619.1 HesB/YadR/YfhF family protein [Heyndrickxia ginsengihumi] | diamond | 120 | 87 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Heyndrickxia | Heyndrickxia ginsengihumi | ||
| 27848446 | 27848446 | PRJNA1073183_P_NODE_18264_length_306_cov_1.884120_g18169_i0 | PRJNA1073183 | 18264 | 306 | 1.88412 | 5.7654072 | Bacillati | 1783272 | Bacteria | Bacteria | 54.7 | 2.98e-6 | NR | WP_154527325.1 | 2606632 | g18169 | i0 | 35.7 | 3.90196078431373 | 98 | 57 | 90.2 | 2 | 18 | 293 | 131 | 228 | WP_154527325.1 MIP/aquaporin family protein [Porcincola intestinalis] | diamond | 1194 | 55.1 | 0.992740471869329 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Porcincola | Porcincola intestinalis | ||
| 28109536 | 28109536 | PRJNA1073183_P_NODE_19145_length_299_cov_1.106195_g19050_i0 | PRJNA1073183 | 19145 | 299 | 1.106195 | 3.30752305 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 91.7 | 2.23e-21 | NR | MDR0839482.1 | 2485925 | g19050 | i0 | 53.5 | 1.81605351170569 | 86 | 38 | 86.3 | 1 | 30 | 287 | 12 | 95 | MDR0839482.1 RidA family protein [Oscillospiraceae bacterium] | diamond | 543 | 91.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 28353755 | 28353755 | PRJNA1073183_P_NODE_21526_length_282_cov_2.004785_g21431_i0 | PRJNA1073183 | 21526 | 282 | 2.004785 | 5.6534937 | Lachnospiraceae | 186803 | Bacteria | Bacteria | 43.5 | 0.0255 | NR | EPD58420.1 | 1078090 | g21431 | i0 | 38.5 | 1.24468085106383 | 39 | 24 | 41.5 | 0 | 281 | 165 | 160 | 198 | EPD58420.1 hypothetical protein HMPREF1215_01438 [Coprococcus sp. HPP0074] | diamond | 351 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Coprococcus | Coprococcus sp. HPP0074 | ||
| 28393780 | 28393780 | PRJNA1073183_P_NODE_24566_length_263_cov_0.857895_g24471_i0 | PRJNA1073183 | 24566 | 263 | 0.857895 | 2.25626385 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 76.6 | 1.15e-14 | NR | MBQ5761870.1 | 2044939 | g24471 | i0 | 38.3 | 2.00760456273764 | 94 | 50 | 98.1 | 2 | 3 | 260 | 103 | 196 | MBQ5761870.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein [Clostridia bacterium] | diamond | 528 | 76.6 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 29458572 | 29458572 | PRJNA1073183_P_NODE_32230_length_244_cov_0.900585_g32135_i0 | PRJNA1073183 | 32230 | 244 | 0.900585 | 2.1974274 | Pelotomaculum | 191373 | Bacteria | Bacteria | 136 | 3.67e-35 | NR | WP_190238800.1 | 78350 | g32135 | i0 | 75 | 3.9344262295082 | 80 | 20 | 98.4 | 0 | 2 | 241 | 417 | 496 | WP_190238800.1 class I SAM-dependent DNA methyltransferase [Pelotomaculum schinkii] | diamond | 960 | 136 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Desulfotomaculaceae | Pelotomaculum | Pelotomaculum schinkii | ||
| 29656374 | 29656374 | PRJNA1073183_P_NODE_23390_length_270_cov_1.228426_g23295_i0 | PRJNA1073183 | 23390 | 270 | 1.228426 | 3.3167502 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 144 | 5.31e-40 | NR | MDB5055081.1 | 1903720 | g23295 | i0 | 78.4 | 6.84444444444444 | 88 | 19 | 97.8 | 0 | 7 | 270 | 150 | 237 | MDB5055081.1 aepX [Bacilli bacterium] | diamond | 1848 | 144 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 29814577 | 29814577 | PRJNA1073183_P_NODE_26591_length_251_cov_0.865169_g26496_i0 | PRJNA1073183 | 26591 | 251 | 0.865169 | 2.17157419 | Bacillus ndiopicus | 1347368 | Bacteria | Bacteria | 43.1 | 0.0292 | NR | WP_042475459.1 | 1347368 | g26496 | i0 | 38.8 | 0.800796812749004 | 67 | 32 | 77.7 | 3 | 34 | 228 | 362 | 421 | WP_042475459.1 DUF4179 domain-containing protein [Bacillus ndiopicus] | diamond | 201 | 43.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus ndiopicus | ||
| 31679153 | 31679153 | PRJNA1073183_P_NODE_9497_length_415_cov_4.318713_g9403_i0 | PRJNA1073183 | 9497 | 415 | 4.318713 | 17.92265895 | Brevibacillus fulvus | 1125967 | Bacteria | Bacteria | 144 | 1.71e-41 | NR | WP_204516782.1 | 1125967 | g9403 | i0 | 61.1 | 4.99518072289157 | 113 | 44 | 81.7 | 0 | 365 | 27 | 2 | 114 | WP_204516782.1 group I truncated hemoglobin [Brevibacillus fulvus] | diamond | 2073 | 144 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Brevibacillus | Brevibacillus fulvus | ||
| 31742403 | 31742403 | PRJNA1073183_P_NODE_19557_length_295_cov_2.774775_g19462_i0 | PRJNA1073183 | 19557 | 295 | 2.774775 | 8.18558625 | Enterococcus faecalis | 1351 | Bacteria | Bacteria | 138 | 2.4e-40 | NR | WP_411401825.1 | 1351 | g19462 | i0 | 100 | 4.98305084745763 | 70 | 0 | 71.2 | 0 | 84 | 293 | 2 | 71 | WP_411401825.1 hypothetical protein, partial [Enterococcus faecalis] | diamond | 1470 | 138 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 31742414 | 31742414 | PRJNA1073183_P_NODE_28877_length_248_cov_0.880000_g28782_i0 | PRJNA1073183 | 28877 | 248 | 0.88 | 2.1824 | Faecalibacillus faecis | 1982628 | Bacteria | Bacteria | 50.4 | 4.84e-5 | NR | WP_405315126.1 | 1982628 | g28782 | i0 | 33.3 | 0.907258064516129 | 75 | 50 | 90.7 | 0 | 3 | 227 | 130 | 204 | WP_405315126.1 50S ribosomal protein L4 [Faecalibacillus faecis] | diamond | 225 | 50.4 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Coprobacillaceae | Faecalibacillus | Faecalibacillus faecis | ||
| 32090554 | 32090554 | PRJNA1073183_P_NODE_20778_length_287_cov_1.219626_g20683_i0 | PRJNA1073183 | 20778 | 287 | 1.219626 | 3.50032662 | Enterococcus viikkiensis | 930854 | Bacteria | Bacteria | 43.9 | 0.0248 | NR | WP_137613817.1 | 930854 | g20683 | i0 | 39.1 | 1.33797909407666 | 64 | 37 | 64.8 | 1 | 202 | 17 | 336 | 399 | WP_137613817.1 single-stranded-DNA-specific exonuclease RecJ [Enterococcus viikkiensis] | diamond | 384 | 43.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus viikkiensis | ||
| 32240500 | 32240500 | PRJNA1073183_P_NODE_32098_length_244_cov_0.900585_g32003_i0 | PRJNA1073183 | 32098 | 244 | 0.900585 | 2.1974274 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 106 | 3.84e-25 | NR | WP_255306961.1 | 1462524 | g32003 | i0 | 62.5 | 4.88114754098361 | 80 | 30 | 98.4 | 0 | 242 | 3 | 43 | 122 | WP_255306961.1 NAD-dependent epimerase/dehydratase family protein [Paraliobacillus sp. PM-2] | diamond | 1191 | 107 | 0.990654205607477 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Paraliobacillus | Paraliobacillus sp. PM-2 | ||
| 32627947 | 32627947 | PRJNA1073183_P_NODE_17440_length_313_cov_1.312500_g17345_i0 | PRJNA1073183 | 17440 | 313 | 1.3125 | 4.108125 | Lactobacillaceae bacterium | 2291323 | Bacteria | Bacteria | 65.1 | 1.2e-9 | NR | MDR3190704.1 | 2291323 | g17345 | i0 | 61.2 | 4.65814696485623 | 49 | 19 | 47 | 0 | 310 | 164 | 99 | 147 | MDR3190704.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Lactobacillaceae bacterium] | diamond | 1458 | 65.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillaceae bacterium | |||
| 32785431 | 32785431 | PRJNA1073183_P_NODE_27380_length_250_cov_0.870056_g27285_i0 | PRJNA1073183 | 27380 | 250 | 0.870056 | 2.17514 | Clostridiaceae bacterium | 1898204 | Bacteria | Bacteria | 48.5 | 3.63e-4 | NR | NLU52398.1 | 1898204 | g27285 | i0 | 36.4 | 1.056 | 88 | 46 | 93.6 | 2 | 15 | 248 | 585 | 672 | NLU52398.1 glutamine synthetase type III [Clostridiaceae bacterium] | diamond | 264 | 48.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;