RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1073183" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA1073183 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15043740 15043740 PRJNA1073183_P_NODE_26472_length_251_cov_0.865169_g26377_i0 PRJNA1073183 26472 251 0.865169 2.17157419 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 163 1.77e-49   NR MBX9724270.1 2364082 g26377 i0 90.4 0.99203187250996006 83 8 99.2 0 251 3 39 121 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 249 163 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
27121799 27121799 PRJNA1073183_P_NODE_34182_length_241_cov_0.916667_g34087_i0 PRJNA1073183 34182 241 0.916667 2.20916747 Oculatella 1240886 Bacteria Bacteria 120 1.65e-29   NR WP_193875348.1 1828648 g34087 i0 67.5 1.99170124481328 80 26 99.6 0 2 241 556 635 WP_193875348.1 N-acetylmuramoyl-L-alanine amidase [Oculatella sp. LEGE 06141] diamond 480 120 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oculatellales Oculatellaceae Oculatella Oculatella sp. LEGE 06141
30825627 30825627 PRJNA1073183_P_NODE_15354_length_333_cov_1.103846_g15259_i0 PRJNA1073183 15354 333 1.103846 3.67580718 Cyanobacteria bacterium J06635_15 3023204 Bacteria Bacteria 46.2 0.00657   NR MEO1349849.1 3023204 g15259 i0 41.5 0.477477477477477 53 31 47.7 0 205 47 1575 1627 MEO1349849.1 amino acid adenylation domain-containing protein [Cyanobacteria bacterium J06635_15] diamond 159 46.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium J06635_15

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;