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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1073183" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 7 ✖

bioproject 1

  • PRJNA1073183 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5290248 5290248 PRJNA1073183_P_NODE_4265_length_611_cov_2.934944_g4173_i0 PRJNA1073183 4265 611 2.934944 17.93250784 Patescibacteria group bacterium 2052139 Bacteria Bacteria 319 1.12e-105   NR MCL4419852.1 2052139 g4173 i0 83.2 0.967266775777414 197 32 96.7 1 609 19 206 401 MCL4419852.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Patescibacteria group bacterium] diamond 591 319 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27003981 27003981 PRJNA1073183_P_NODE_29682_length_247_cov_0.885057_g29587_i0 PRJNA1073183 29682 247 0.885057 2.18609079 Patescibacteria group bacterium 2052139 Bacteria Bacteria 141 3.039999999999999e-38   NR MCL4419852.1 2052139 g29587 i0 87.7 0.983805668016194 81 10 98.4 0 246 4 305 385 MCL4419852.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Patescibacteria group bacterium] diamond 243 141 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28480126 28480126 PRJNA1073183_P_NODE_26466_length_251_cov_0.865169_g26371_i0 PRJNA1073183 26466 251 0.865169 2.17157419 Pseudomonadati 3379134 Bacteria Bacteria 47.8 6.84e-4   NR OGD09954.1 1797269 g26371 i0 45.5 3.95617529880478 55 28 64.5 2 187 26 354 407 OGD09954.1 MAG: hypothetical protein A2Y86_03130 [Candidatus Aminicenantes bacterium RBG_13_62_12] diamond 993 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium RBG_13_62_12
30383763 30383763 PRJNA1073183_P_NODE_2073_length_855_cov_1.956522_g1999_i0 PRJNA1073183 2073 855 1.956522 16.7282631 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 58.2 1.94e-5   NR MFT4569778.1 2838779 g1999 i0 44.4 0.221052631578947 63 30 20.4 1 179 6 294 356 MFT4569778.1 cysteine-rich repeat protein [Candidatus Binatia bacterium] diamond 189 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30415295 30415295 PRJNA1073183_P_NODE_12253_length_369_cov_1.297297_g12158_i0 PRJNA1073183 12253 369 1.297297 4.78702593 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 90.1 1.76e-18   NR RKW21079.1 2044595 g12158 i0 51.1 0.764227642276423 94 35 67.5 1 94 342 3 96 RKW21079.1 MAG: molecular chaperone DnaJ [Candidatus Altimarinota bacterium] diamond 282 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31584563 31584563 PRJNA1073183_P_NODE_23576_length_269_cov_1.178571_g23481_i0 PRJNA1073183 23576 269 1.178571 3.17035599 Patescibacteria group bacterium 2052139 Bacteria Bacteria 82.8 2.76e-16   NR MBU6323319.1 2052139 g23481 i0 45.3 1.9182156133829 86 45 95.9 1 11 268 132 215 MBU6323319.1 diaminopimelate decarboxylase [Patescibacteria group bacterium] diamond 516 82.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32153866 32153866 PRJNA1073183_P_NODE_22278_length_277_cov_2.176471_g22183_i0 PRJNA1073183 22278 277 2.176471 6.02882467 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 51.2 5.57e-5   NR HZW61089.1 2803731 g22183 i0 37.3 0.812274368231047 75 47 81.2 0 9 233 244 318 HZW61089.1 SulP family inorganic anion transporter [Candidatus Babeliales bacterium] diamond 225 51.2 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;