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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1073183" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA1073183 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18039130 18039130 PRJNA1073183_P_NODE_4635_length_587_cov_2.235409_g4543_i0 PRJNA1073183 4635 587 2.235409 13.12185083 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 224 2.12e-69   NR XP_013760592.1 461836 g4543 i0 66.5 0.93015332197615 182 55 92 2 47 586 30 207 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 546 224 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27003974 27003974 PRJNA1073183_P_NODE_17162_length_316_cov_1.238683_g17067_i0 PRJNA1073183 17162 316 1.238683 3.91423828 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 99.4 5.17e-24   NR XP_013759960.1 461836 g17067 i0 54.1 1.38607594936709 85 33 75 1 238 2 1 85 XP_013759960.1 40S ribosomal protein S12 [Thecamonas trahens ATCC 50062] diamond 438 99.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27161958 27161958 PRJNA1073183_P_NODE_28582_length_248_cov_1.760000_g28487_i0 PRJNA1073183 28582 248 1.76 4.3648 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 79.7 3.63e-15   NR XP_013759526.1 461836 g28487 i0 53.1 2.52822580645161 64 30 77.4 0 223 32 32 95 XP_013759526.1 uncharacterized protein AMSG_02624 [Thecamonas trahens ATCC 50062] diamond 627 79.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29624747 29624747 PRJNA1073183_P_NODE_23790_length_267_cov_1.871134_g23695_i0 PRJNA1073183 23790 267 1.871134 4.99592778 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 71.6 7.44e-14   NR XP_013759950.1 461836 g23695 i0 45 0.674157303370786 60 33 67.4 0 245 66 2 61 XP_013759950.1 uncharacterized protein AMSG_03604 [Thecamonas trahens ATCC 50062] diamond 180 71.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30690733 30690733 PRJNA1073183_P_NODE_20853_length_286_cov_1.807512_g20758_i0 PRJNA1073183 20853 286 1.807512 5.16948432 root 1 Root_unresolved Root_unresolved 91.7 4.07e-19   NR XP_013760002.1 461836 g20758 i0 54.8 13.4265734265734 84 38 88.1 0 256 5 123 206 XP_013760002.1 uncharacterized protein AMSG_11769 [Thecamonas trahens ATCC 50062] diamond 3840 91.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31995664 31995664 PRJNA1073183_P_NODE_24378_length_264_cov_1.120419_g24283_i0 PRJNA1073183 24378 264 1.120419 2.95790616 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 99.4 6.31e-22   NR XP_013759474.1 461836 g24283 i0 56.8 1 88 34 100 2 264 1 1710 1793 XP_013759474.1 ubiquitin carboxyl-terminal hydrolase 34 [Thecamonas trahens ATCC 50062] diamond 264 99.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32272040 32272040 PRJNA1073183_P_NODE_31258_length_245_cov_0.895349_g31163_i0 PRJNA1073183 31258 245 0.895349 2.19360505 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 68.9 1.81e-13   NR XP_013755117.1 461836 g31163 i0 61.8 2.19183673469388 55 21 67.3 0 26 190 1 55 XP_013755117.1 uncharacterized protein AMSG_08702 [Thecamonas trahens ATCC 50062] diamond 537 69.3 0.994227994227994 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;