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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA1072736" and tax_clade = "Opisthokonta"

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tax_phylum 3

tax_kingdom 2

tax_superkingdom 1

tax_clade 1

  • Opisthokonta · 12 ✖

bioproject 1

  • PRJNA1072736 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26710399 26710399 PRJNA1072736_S_NODE_4761_length_178_cov_4.703704_g4756_i0 PRJNA1072736 4761 178 4.703704 8.37259312 root 1 Root_unresolved Root_unresolved 119 8.560000000000001e-33   NR AAR11853.1 10090 g4756 i0 98.3 15.8932584269663 59 1 99.4 0 2 178 77 135 AAR11853.1 reverse transcriptase, partial [Mus musculus] diamond 2829 119 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
27320335 27320335 PRJNA1072736_S_NODE_6223_length_162_cov_1.579832_g6218_i0 PRJNA1072736 6223 162 1.579832 2.55932784 Ovis ammon polii x Ovis aries 2918886 Chordata Chordata 69.7 8.77e-13   NR KAI4586444.1 2918886 g6218 i0 84.6 0.722222222222222 39 6 72.2 0 128 12 139 177 KAI4586444.1 hypothetical protein MJG53_004231 [Ovis ammon polii x Ovis aries] diamond 117 69.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis ammon polii x Ovis aries
28077987 28077987 PRJNA1072736_S_NODE_2365_length_228_cov_15.772973_g2360_i0 PRJNA1072736 2365 228 15.772973 35.96237844 Haliotis asinina 109174 Mollusca Mollusca 43.5 0.0159   NR XP_067660915.1 109174 g2360 i0 36.5 2.48684210526316 63 34 81.6 2 193 8 144 201 XP_067660915.1 uncharacterized protein [Haliotis asinina] diamond 567 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
28164405 28164405 PRJNA1072736_S_NODE_3765_length_194_cov_1.556291_g3760_i0 PRJNA1072736 3765 194 1.556291 3.01920454 root 1 Root_unresolved Root_unresolved 129 7.98e-33   NR AAA39757.1 10090 g3760 i0 98.4 29.6907216494845 64 1 99 0 193 2 5 68 AAA39757.1 pol protein, partial [Mus musculus] diamond 5760 129 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
28741131 28741131 PRJNA1072736_S_NODE_5867_length_166_cov_1.317073_g5862_i0 PRJNA1072736 5867 166 1.317073 2.18634118 Phyllostomus discolor 89673 Chordata Chordata 41.6 0.0302   NR KAF6084349.1 89673 g5862 i0 64 0.451807228915663 25 9 45.2 0 120 46 17 41 KAF6084349.1 hypothetical protein HJG60_008620 [Phyllostomus discolor] diamond 75 41.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Phyllostomidae Phyllostomus Phyllostomus discolor
28890427 28890427 PRJNA1072736_S_NODE_3488_length_199_cov_1.717949_g3483_i0 PRJNA1072736 3488 199 1.717949 3.41871851 Metazoa 33208 Mollusca Mollusca 60.1 1.53e-8   NR XP_046346306.1 6454 g3483 i0 100 32.713567839196 31 0 46.7 0 3 95 491 521 XP_046346306.1 T-complex protein 1 subunit beta-like [Haliotis rufescens] diamond 6510 60.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
29206494 29206494 PRJNA1072736_S_NODE_4289_length_185_cov_3.612676_g4284_i0 PRJNA1072736 4289 185 3.612676 6.6834506 Cladistia 1338366 Chordata Chordata 44.7 0.00368   NR XP_043941443.1 7888 g4284 i0 95 31.7837837837838 20 1 32.4 0 124 183 1756 1775 XP_043941443.1 ubiquitin carboxyl-terminal hydrolase 24 [Protopterus annectens] diamond 5880 45.1 0.991130820399113 Eukaryota Opisthokonta Metazoa Chordata   Ceratodontiformes Protopteridae Protopterus Protopterus annectens
29206495 29206495 PRJNA1072736_S_NODE_6029_length_164_cov_1.677686_g6024_i0 PRJNA1072736 6029 164 1.677686 2.75140504 root 1 Root_unresolved Root_unresolved 55.5 4.02e-7   NR KAI5938739.1 9974 g6024 i0 64.1 17.1585365853659 39 14 71.3 0 135 19 221 259 KAI5938739.1 LINE-1 retrotransposable element ORF2 protein [Manis javanica] diamond 2814 55.8 0.99462365591397806 Eukaryota Opisthokonta Metazoa Chordata Mammalia Pholidota Manidae Manis Manis javanica
29964205 29964205 PRJNA1072736_S_NODE_7591_length_151_cov_0.870370_g7586_i0 PRJNA1072736 7591 151 0.87037 1.3142587 Chordata 7711 Chordata Chordata 48.9 5.99e-5   NR KAI8522083.1 7741 g7586 i0 53.7 21.9735099337748 41 18 79.5 1 32 151 28 68 KAI8522083.1 hypothetical protein Bbelb_018370 [Branchiostoma belcheri] diamond 3318 48.9 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
30130226 30130226 PRJNA1072736_S_NODE_6052_length_164_cov_1.165289_g6047_i0 PRJNA1072736 6052 164 1.165289 1.91107396 Muntiacus reevesi 9886 Chordata Chordata 55.5 2.69e-7   NR KAB0387345.1 9886 g6047 i0 51.2 0.75 41 20 75 0 164 42 192 232 KAB0387345.1 hypothetical protein FD755_002301, partial [Muntiacus reevesi] diamond 123 55.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus reevesi
32153859 32153859 PRJNA1072736_S_NODE_2178_length_236_cov_1.564767_g2173_i0 PRJNA1072736 2178 236 1.564767 3.69285012 Extremus antarcticus 702011 Fungi Fungi 162 3.77e-49   NR KAK3052181.1 702011 g2173 i0 92.3 1.98305084745763 78 6 99.2 0 234 1 70 147 KAK3052181.1 Mitochondrial matrix iron chaperone [Extremus antarcticus] diamond 468 162 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Extremaceae Extremus Extremus antarcticus
32785419 32785419 PRJNA1072736_S_NODE_7580_length_151_cov_0.870370_g7575_i0 PRJNA1072736 7580 151 0.87037 1.3142587 Mirounga angustirostris 9716 Chordata Chordata 77.4 5.84e-15   NR XP_064441285.1 9716 g7575 i0 68.9 0.894039735099338 45 14 89.4 0 14 148 85 129 XP_064441285.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X2 [Mirounga angustirostris] diamond 135 77.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Phocidae Mirounga Mirounga angustirostris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;