RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1069776" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA1069776 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3565297 3565297 PRJNA1069776_S_NODE_403_length_2095_cov_48.130117_g395_i0 PRJNA1069776 403 2095 48.130117 1008.32595115 Moloney murine leukemia virus 11801 Viruses Viruses 1281 0   NR NP_057933.2 11801 g395 i0 97.4 2.81384248210024 655 17 93.8 0 1969 5 677 1331 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 5895 1281 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
9112664 9112664 PRJNA1069776_S_NODE_6808_length_344_cov_2.295681_g6494_i0 PRJNA1069776 6808 344 2.295681 7.89714264 Marsupial endogenous gammaretrovirus 2 3386030 Viruses Viruses 135 3.6399999999999997e-34   NR DBA62711.1 3386030 g6494 i0 56.6 0.98546511627907 113 49 98.5 0 344 6 922 1034 DBA62711.1 TPA_asm: Pol [Marsupial endogenous gammaretrovirus 2] diamond 339 135 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Marsupial endogenous gammaretrovirus 2
18866289 18866289 PRJNA1069776_S_NODE_415_length_1951_cov_49.801887_g395_i1 PRJNA1069776 415 1951 49.801887 971.63481537 Moloney murine leukemia virus 11801 Viruses Viruses 1122 0   NR NP_057933.2 11801 g395 i1 97.6 2.64325986673501 573 14 88.1 0 229 1947 759 1331 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 5157 1122 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
28204152 28204152 PRJNA1069776_S_NODE_37186_length_179_cov_2.117647_g36872_i0 PRJNA1069776 37186 179 2.117647 3.79058813 Erythrocytic necrosis virus 1543320 Viruses Viruses 91.7 9.46e-23   NR QCF47522.1 1543320 g36872 i0 88.2 0.854748603351955 51 6 85.5 0 3 155 6 56 QCF47522.1 hypothetical protein, partial [Erythrocytic necrosis virus] diamond 153 91.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
29025613 29025613 PRJNA1069776_S_NODE_54168_length_151_cov_2.222222_g53854_i0 PRJNA1069776 54168 151 2.222222 3.35555522 Adintovirus anguilla10665 3115889 Viruses Viruses 53.1 1.81e-6   NR DBA49780.1 3115889 g53854 i0 64.7 1.35099337748344 34 12 67.5 0 151 50 217 250 DBA49780.1 MAG TPA_asm: Penton [Adintovirus anguilla10665] diamond 204 53.1 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
29151951 29151951 PRJNA1069776_S_NODE_37209_length_179_cov_2.036765_g36895_i0 PRJNA1069776 37209 179 2.036765 3.64580935 Larimichthys croaker adintovirus 2609857 Viruses Viruses 68.2 5.78e-13   NR DBA47696.1 2609857 g36895 i0 64.6 0.804469273743017 48 17 80.4 0 166 23 64 111 DBA47696.1 MAG TPA_asm: GasderminX [Adintovirus homo13306] diamond 144 68.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Larimichthys croaker adintovirus
29341125 29341125 PRJNA1069776_S_NODE_40149_length_173_cov_1.684615_g39835_i0 PRJNA1069776 40149 173 1.684615 2.91438395 Bacteriophage sp. 38018 Viruses Viruses 105 8.66e-28   NR DAH26090.1 38018 g39835 i0 88.9 0.936416184971098 54 6 93.6 0 164 3 1 54 DAH26090.1 MAG TPA: hypothetical protein [Bacteriophage sp.] diamond 162 105 1 Viruses               Bacteriophage sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;