RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1069776" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA1069776 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29553363 29553363 PRJNA1069776_S_NODE_31490_length_193_cov_2.506667_g31176_i0 PRJNA1069776 31490 193 2.506667 4.83786731 Thermoproteati 1783275 Archaea Archaea 98.2 2.1699999999999998e-23   NR MEM3714555.1 2268198 g31176 i0 68.8 1.98963730569948 64 20 99.5 0 1 192 158 221 MEM3714555.1 hypothetical protein [Nitrososphaeria archaeon] diamond 384 99 0.991919191919192 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria       Nitrososphaeria archaeon
31268066 31268066 PRJNA1069776_S_NODE_34295_length_185_cov_12.640845_g33981_i0 PRJNA1069776 34295 185 12.640845 23.38556325 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 42 0.033   NR HEX9318775.1 2169593 g33981 i0 34.4 0.989189189189189 61 31 84.3 2 170 15 504 564 HEX9318775.1 tandem-95 repeat protein [Nitrososphaeraceae archaeon] diamond 183 42 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;